RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 MYEF2Q9P2K5 600 aaKnown RBP16.03■□□□□ 0.16
NUP54-205ENST00000507257 PCOLCE2Q9UKZ9 415 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ZNF346Q9UL40 294 aaKnown RBP16.03■□□□□ 0.16
NUP54-205ENST00000507257 MRPS2Q9Y399 296 aaKnown RBP16.03■□□□□ 0.16
NUP54-205ENST00000507257 A0A1W2PPC1 479 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 OTOL1A6NHN0 477 aaPredicted RBP16.02■□□□□ 0.16
NUP54-205ENST00000507257 BLOC1S5-TXNDC5H3BN57 136 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 FADS1O60427 444 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 RAB6AP20340 208 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 CCKBRP32239 447 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 IGFALSP35858 605 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 ARRB1P49407 418 aaPredicted RBP16.02■□□□□ 0.16
NUP54-205ENST00000507257 SLC17A1Q14916 467 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 MESTQ5EB52 335 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 NKAPLQ5M9Q1 402 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 TMEM225Q6GV28 225 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 WBP2NLQ6ICG8 309 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 PAPD4Q6PIY7 484 aaKnown RBP16.02■□□□□ 0.16
NUP54-205ENST00000507257 ATG4DQ86TL0 474 aaPredicted RBP16.02■□□□□ 0.16
NUP54-205ENST00000507257 OR4K17Q8NGC6 315 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 OR4N2Q8NGD1 307 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 RNF128Q8TEB7 428 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 RERGQ96A58 199 aaPredicted RBP16.02■□□□□ 0.16
NUP54-205ENST00000507257 APOOQ9BUR5 198 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 TLNRD1Q9H1K6 362 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 SRA1Q9HD15 236 aaKnown RBP16.02■□□□□ 0.16
NUP54-205ENST00000507257 PRMT8Q9NR22 394 aaPredicted RBP16.02■□□□□ 0.16
NUP54-205ENST00000507257 GRHPRQ9UBQ7 328 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 CKLFQ9UBR5 152 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 TBC1D29Q9UFV1 150 aa16.02■□□□□ 0.16
NUP54-205ENST00000507257 MRPS23Q9Y3D9 190 aaKnown RBP16.02■□□□□ 0.16
NUP54-205ENST00000507257 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.02■□□□□ 0.15
NUP54-205ENST00000507257 MEX3AA1L020 520 aaKnown RBP16.02■□□□□ 0.15
NUP54-205ENST00000507257 DBX1A6NMT0 343 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 H0YGG7 62 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 S100A8P05109 93 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 CRYBA1P05813 215 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 CRHP06850 196 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 SMIM6P0DI80 62 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 SPP1P10451 314 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 CENPAP49450 140 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 ADPRHP54922 357 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 ARF3P61204 181 aaPredicted RBP16.02■□□□□ 0.15
NUP54-205ENST00000507257 ROM1Q03395 351 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 PJVKQ0ZLH3 352 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 PMPCAQ10713 525 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 SGCGQ13326 291 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 BEX5Q5H9J7 111 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 TMEM71Q6P5X7 295 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 TMEM184AQ6ZMB5 413 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 ZNF627Q7L945 461 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 ZNF584Q8IVC4 421 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 PAQR4Q8N4S7 273 aaPredicted RBP16.02■□□□□ 0.15
NUP54-205ENST00000507257 FOXRED1Q96CU9 486 aaPredicted RBP16.02■□□□□ 0.15
NUP54-205ENST00000507257 ULBP3Q9BZM4 244 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 NMES1Q9C002 83 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 OR10H1Q9Y4A9 318 aa16.02■□□□□ 0.15
NUP54-205ENST00000507257 HEATR5AQ86XA9 2040 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 LOC390937A0A1W2PQ73 354 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 TVP23AA6NH52 213 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 C4orf47A7E2U8 309 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 ZNF208O43345 1280 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 OR10H2O60403 315 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 DUS4LO95620 317 aaKnown RBP16.01■□□□□ 0.15
NUP54-205ENST00000507257 CD2P06729 351 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 PSMB6P28072 239 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 CYCSP99999 105 aaKnown RBP16.01■□□□□ 0.15
NUP54-205ENST00000507257 PPP1R1AQ13522 171 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 GPR18Q14330 331 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 LRRC37A5PQ49AS3 106 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 DGAT2L6Q6ZPD8 337 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 RNF44Q7L0R7 432 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 PRSS41Q7RTY9 318 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 TAF8Q7Z7C8 310 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 ZNF679Q8IYX0 411 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 OR4A4PQ8NGN8 299 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 AQP3Q92482 292 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 SAT2Q96F10 170 aaPredicted RBP16.01■□□□□ 0.15
NUP54-205ENST00000507257 SEC22AQ96IW7 307 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 EGLN1Q9GZT9 426 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 KCNK15Q9H427 330 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 Q9N2J8 555 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 UQCC1Q9NVA1 299 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 KLK13Q9UKR3 277 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 DHDHQ9UQ10 334 aa16.01■□□□□ 0.15
NUP54-205ENST00000507257 PTPRSQ13332 1948 aa16■□□□□ 0.15
NUP54-205ENST00000507257 CCSO14618 274 aa16■□□□□ 0.15
NUP54-205ENST00000507257 HOXC4P09017 264 aaPredicted RBP16■□□□□ 0.15
NUP54-205ENST00000507257 SLC6A9P48067 706 aa16■□□□□ 0.15
NUP54-205ENST00000507257 CX3CR1P49238 355 aa16■□□□□ 0.15
NUP54-205ENST00000507257 CPEB4Q17RY0 729 aaKnown RBP eCLIP16■□□□□ 0.15
NUP54-205ENST00000507257 RNASE10Q5GAN6 216 aaKnown RBP16■□□□□ 0.15
NUP54-205ENST00000507257 C1orf100Q5SVJ3 147 aa16■□□□□ 0.15
NUP54-205ENST00000507257 AWAT2Q6E213 333 aa16■□□□□ 0.15
NUP54-205ENST00000507257 NPSR1Q6W5P4 371 aa16■□□□□ 0.15
NUP54-205ENST00000507257 ASB12Q8WXK4 309 aa16■□□□□ 0.15
NUP54-205ENST00000507257 TSPAN32Q96QS1 320 aa16■□□□□ 0.15
NUP54-205ENST00000507257 CST11Q9H112 138 aa16■□□□□ 0.15
NUP54-205ENST00000507257 FGF22Q9HCT0 170 aa16■□□□□ 0.15
NUP54-205ENST00000507257 GRXCR1A8MXD5 290 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms