RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 BDKRB1P46663 353 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 HSPA13P48723 471 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC7A2P52569 658 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 DIO3P55073 304 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 NME5P56597 212 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 RPS15AP62244 130 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 HMGCS1Q01581 520 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ACY1Q03154 408 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 LIPEQ05469 1076 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 RGS1Q08116 209 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 BIKQ13323 160 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 DDX39BQ13838 428 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC17A1Q14916 467 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 KIAA0040Q15053 153 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC5A12Q1EHB4 618 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 C18orf21Q32NC0 220 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 CCSMST1Q4G0I0 132 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 IFI44LQ53G44 452 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 FBXO48Q5FWF7 155 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 TCHHL1Q5QJ38 904 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 DCAF12Q5T6F0 453 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 KHDRBS2Q5VWX1 349 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 REP15Q6BDI9 236 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 NANOGP8Q6NSW7 305 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ERICH5Q6P6B1 374 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 REG3GQ6UW15 175 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 SCIMPQ6UWF3 145 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 GCNT7Q6ZNI0 430 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 Q6ZRG5 221 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 RPS27LQ71UM5 84 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 ABHD13Q7L211 337 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 TAF8Q7Z7C8 310 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 SPATA24Q86W54 205 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 FUNDC1Q8IVP5 155 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 SERPINA12Q8IW75 414 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 STHQ8IWL8 128 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ZCCHC7Q8N3Z6 543 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 LIX1Q8N485 282 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 Q8N7P7 452 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 CHDHQ8NE62 594 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 OR2L3Q8NG85 312 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4E2Q8NGC2 313 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 OR52E4Q8NGH9 312 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 OR52E1Q8NGJ3 308 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 OR5AR1Q8NGP9 310 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 OR2A1Q8NGT9 310 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 RASSF5Q8WWW0 418 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 OR1E3Q8WZA6 343 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 HAS2Q92819 552 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 KLK6Q92876 244 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 NCLNQ969V3 563 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 PPWD1Q96BP3 646 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 PPCDCQ96CD2 204 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 NTNG2Q96CW9 530 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ZBED6CLQ96FA7 236 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 DUS3LQ96G46 650 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 VMP1Q96GC9 406 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 FCRL1Q96LA6 429 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 BMFQ96LC9 184 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 RNF145Q96MT1 663 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 CCDC115Q96NT0 180 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 PRAP1Q96NZ9 151 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4K3Q96R72 315 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 NPAS2Q99743 824 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 KCTD14Q9BQ13 255 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 DPH7Q9BTV6 452 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 C1orf50Q9BV19 199 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 OSBPL10Q9BXB5 764 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ABCG4Q9H172 646 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 CLMPQ9H6B4 373 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 REEP4Q9H6H4 257 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 TRIM45Q9H8W5 580 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 GORASP2Q9H8Y8 452 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 NANOGQ9H9S0 305 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 MRPS30Q9NP92 439 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 PRMT8Q9NR22 394 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 FARSBQ9NSD9 589 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 ARMC1Q9NVT9 282 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 HRASLS2Q9NWW9 162 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 LYARQ9NX58 379 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 TAS2R7Q9NYW3 318 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ABCD2Q9UBJ2 740 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 TRPC4Q9UBN4 977 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF282Q9UDV7 671 aaPredicted RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC23A2Q9UGH3 650 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 APOBEC3BQ9UH17 382 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 TAC3Q9UHF0 121 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC7A8Q9UHI5 535 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ATP6V1HQ9UI12 483 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 BTNL2Q9UIR0 455 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF225Q9UK10 706 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 SAMD4AQ9UPU9 718 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 ERVK-19Q9WJR5 959 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 AP4S1Q9Y587 144 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 GMEB1Q9Y692 573 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF780BQ9Y6R6 833 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 NYNRINQ9P2P1 1898 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 KIAA1671Q9BY89 1806 aa2□□□□□ -2.09
TOPBP1-205ENST00000506779 TNRC18O15417 2968 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms