RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	FPR2	P25090	351 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	RPL4	P36578	427 aa	Known RBP	13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	RPL27	P61353	136 aa	Known RBP	13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	MSMP	Q1L6U9	139 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	CYBRD1	Q53TN4	286 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	RABL3	Q5HYI8	236 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	AVPI1	Q5T686	147 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	DCAF12L2	Q5VW00	463 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	THSD4	Q6ZMP0	1018 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	ARPIN	Q7Z6K5	226 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	CYP4Z1	Q86W10	505 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	NKAIN4	Q8IVV8	208 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	BPIFB2	Q8N4F0	458 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	OR2T12	Q8NG77	320 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	OR4D11	Q8NGI4	311 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	GCDH	Q92947	438 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	YIPF5	Q969M3	257 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	BPIFA2	Q96DR5	249 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	COG8	Q96MW5	612 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	MRPL13	Q9BYD1	178 aa	Known RBP	13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	ZDHHC8	Q9ULC8	765 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	NDRG4	Q9ULP0	352 aa	Known RBP	13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	FAM157A	C9JC47	383 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066		H3BSA7	217 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	SURF4	O15260	269 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	TIMM8A	O60220	97 aa	Predicted RBP	13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	LYPD3	O95274	346 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	SLC2A10	O95528	541 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	THY1	P04216	161 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	IFNW1	P05000	195 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	ZNF32	P17041	273 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	TUBG1	P23258	451 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	CDA	P32320	146 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	OR1E2	P47887	323 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	CTXN1	P60606	82 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	FAM27B	Q5VT28	67 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	OAF	Q86UD1	273 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	MEX3D	Q86XN8	651 aa	Known RBP	13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	ABHD4	Q8TB40	342 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	NANP	Q8TBE9	248 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	C10orf82	Q8WW14	230 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	LIPH	Q8WWY8	451 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	ZMYND19	Q96E35	227 aa	Predicted RBP	13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	PRRC1	Q96M27	445 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	PRSS27	Q9BQR3	290 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	WAC	Q9BTA9	647 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	RBM4	Q9BWF3	364 aa	Known RBP	13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	RACGAP1	Q9H0H5	632 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	TUBG2	Q9NRH3	451 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	GRHPR	Q9UBQ7	328 aa		13.98	□□□□□ -0.17
DDR1-256	ENST00000505066	LOC100653049	A0A140TA62	436 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	ELOVL7	A1L3X0	281 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	EFCAB9	A8MZ26	197 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	NDUFAB1	O14561	156 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	SHOX2	O60902	331 aa	Predicted RBP	13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	GMNN	O75496	209 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	RP2	O75695	350 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	KRT34	O76011	436 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	NCR1	O76036	304 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	CST2	P09228	141 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	EPHA1	P21709	976 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	MSR1	P21757	451 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	KDELR2	P33947	212 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	LIMS1	P48059	325 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	PPP1CB	P62140	327 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	ERVK-25	P63136	954 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	LAPTM4A	Q15012	233 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	TRAM2	Q15035	370 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	SPATA46	Q5T0L3	261 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	ARMC4	Q5T2S8	1044 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	FKBP9P1	Q75LS8	142 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	WDFY1	Q8IWB7	410 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	C3orf56	Q8N813	242 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	NPEPL1	Q8NDH3	523 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	MOSPD2	Q8NHP6	518 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	SEPHS2	Q99611	448 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	UBAP1	Q9NZ09	502 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	WIPI2	Q9Y4P8	454 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	CAPN7	Q9Y6W3	813 aa		13.97	□□□□□ -0.17
DDR1-256	ENST00000505066	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.97	□□□□□ -0.17	1e-7	■■■□□ 17.9
DDR1-256	ENST00000505066	FAM220BP	B1ANY3	271 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	ZNF682	O95780	498 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	ABHD16A	O95870	558 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	MMP7	P09237	267 aa	Predicted RBP	13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	TNFRSF1A	P19438	455 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	TNFRSF1B	P20333	461 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	SLC9A3	P48764	834 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	ERVS71-1	P61550	626 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	LMO4	P61968	165 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	SELENOW	P63302	87 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	RUNX1T1	Q06455	604 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	SCRN3	Q0VDG4	424 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	MBNL2	Q5VZF2	373 aa	Known RBP	13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	ZNF730	Q6ZMV8	503 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	SYT9	Q86SS6	491 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	CALHM3	Q86XJ0	350 aa		13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	RNF113B	Q8IZP6	322 aa	Known RBP	13.96	□□□□□ -0.17
DDR1-256	ENST00000505066	AKR7L	Q8NHP1	331 aa		13.96	□□□□□ -0.17

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