RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 MAP3K8P41279 467 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ACTR1BP42025 376 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ACTR1AP61163 376 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ALKBH1Q13686 389 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 RUNX2Q13950 521 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 INPP5JQ15735 1006 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 HNRNPA1L2Q32P51 320 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF619Q8N2I2 560 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 KDM8Q8N371 416 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 KCNRGQ8N5I3 272 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 OR6S1Q8NH40 331 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 AKR7LQ8NHP1 331 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 CCL4L1Q8NHW4 92 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 CD300LFQ8TDQ1 290 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 MAFIPQ8WZ33 124 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 ARL11Q969Q4 196 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 SLC25A36Q96CQ1 311 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 RRNAD1Q96FB5 475 aaKnown RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 PITHD1Q9GZP4 211 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 DPEP2Q9H4A9 486 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 RHOFQ9HBH0 211 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 INPP5EQ9NRR6 644 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 EMC3Q9P0I2 261 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 KCNG2Q9UJ96 466 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 CES1P1Q9UKY3 287 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 TNFSF18Q9UNG2 199 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 VSIG4Q9Y279 399 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 AMDHD2Q9Y303 409 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 KLF2Q9Y5W3 355 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-208ENST00000504387 URGCP-MRPS24S4R325 110 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 KIF26BQ2KJY2 2108 aa6.91□□□□□ -1.3
NEDD9-208ENST00000504387 COL4A3Q01955 1670 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 H0Y8X5 98 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 FGF17O60258 216 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 HTR3BO95264 441 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 SFTPBP07988 381 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 HOXB5P09067 269 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF44P15621 663 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 ABCD3P28288 659 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 AGTR1P30556 359 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 CALCRP30988 508 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 DIO1P49895 249 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 PLAURQ03405 335 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 DGAT2L6Q6ZPD8 337 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 ACOT7LQ6ZUV0 252 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 NPEPL1Q8NDH3 523 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 OR5AP2Q8NGF4 316 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 RSPRY1Q96DX4 576 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 SFXN1Q9H9B4 322 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 PLEKHA1Q9HB21 404 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 ACKR4Q9NPB9 350 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 PHPT1Q9NRX4 125 aaPredicted RBP6.9□□□□□ -1.3
NEDD9-208ENST00000504387 INSL6Q9Y581 213 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 FREM3P0C091 2139 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 FANCMQ8IYD8 2048 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 ANAPC1Q9H1A4 1944 aa6.9□□□□□ -1.3
NEDD9-208ENST00000504387 EDDM13A0A1B0GTR0 161 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 A0A1B0GV90 55 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 SULT2B1O00204 365 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 OR10H2O60403 315 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 WNT11O96014 354 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 SPARCP09486 303 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 GAAP10253 952 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 TYRP1P17643 537 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 TSFMP43897 325 aaKnown RBP6.9□□□□□ -1.31
NEDD9-208ENST00000504387 EIPR1Q53HC9 387 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF704Q6ZNC4 412 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-208ENST00000504387 EIF4E3Q8N5X7 224 aaKnown RBP6.9□□□□□ -1.31
NEDD9-208ENST00000504387 TMEM104Q8NE00 496 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 OR51F2Q8NH61 342 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 CCDC107Q8WV48 283 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 FOXRED1Q96CU9 486 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-208ENST00000504387 NECAB3Q96P71 396 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-208ENST00000504387 MOGAT1Q96PD6 335 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 KLHDC3Q9BQ90 382 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 SULT4A1Q9BR01 284 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 PRO1933Q9H354 126 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 SRMSQ9H3Y6 488 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 PELI2Q9HAT8 420 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 CHMP1AQ9HD42 196 aaPredicted RBP6.9□□□□□ -1.31
NEDD9-208ENST00000504387 MRPS33Q9Y291 106 aaKnown RBP6.9□□□□□ -1.31
NEDD9-208ENST00000504387 PCDHGA1Q9Y5H4 931 aa6.9□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF106Q9H2Y7 1883 aaKnown RBP6.9□□□□□ -1.31
NEDD9-208ENST00000504387 A0A1W2PPC1 479 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 A0A1W2PQU0 124 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 SLC33A1O00400 549 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-208ENST00000504387 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-208ENST00000504387 P2RX6O15547 441 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 EIF1BO60739 113 aaKnown RBP6.89□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF205O95201 554 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 EIF1P41567 113 aaKnown RBP6.89□□□□□ -1.31
NEDD9-208ENST00000504387 NPY4RP50391 375 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 RAB28P51157 221 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 GPR143P51810 404 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF616Q08AN1 781 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 POU4F2Q12837 409 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 IRF4Q15306 451 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 RAB11BQ15907 218 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF77Q15935 545 aa6.89□□□□□ -1.31
NEDD9-208ENST00000504387 CORO6Q6QEF8 472 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms