RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RFPL4BQ6ZWI9 263 aa13.2□□□□□ -0.3
PDLIM7-210ENST00000503827 IFT20Q8IY31 132 aa13.2□□□□□ -0.3
PDLIM7-210ENST00000503827 OR2Z1Q8NG97 314 aa13.2□□□□□ -0.3
PDLIM7-210ENST00000503827 EPS8L3Q8TE67 593 aaKnown RBP13.2□□□□□ -0.3
PDLIM7-210ENST00000503827 NEIL1Q96FI4 390 aaPredicted RBP13.2□□□□□ -0.3
PDLIM7-210ENST00000503827 TEX37Q96LM6 180 aa13.2□□□□□ -0.3
PDLIM7-210ENST00000503827 RASSF4Q9H2L5 321 aa13.2□□□□□ -0.3
PDLIM7-210ENST00000503827 LOC100509620A0A075B734 347 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 H0YL77 283 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 SURF4O15260 269 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 ANP32DO95626 131 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 PGA4P0DJD7 388 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 PGA3P0DJD8 388 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 THRBP10828 461 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 ARHGDIAP52565 204 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 CLRN1P58418 232 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 CEP85LQ5SZL2 805 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 SLC27A4Q6P1M0 643 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 GDPGP1Q6ZNW5 385 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 Q6ZSV7 163 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 ZSCAN4Q8NAM6 433 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 MNS1Q8NEH6 495 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 ITLN1Q8WWA0 313 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 MCHR2Q969V1 340 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 PCGF1Q9BSM1 259 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 TMEM43Q9BTV4 400 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 C16orf95Q9H693 158 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 TMEM27Q9HBJ8 222 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 BCL2L10Q9HD36 194 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 IL19Q9UHD0 177 aa13.19□□□□□ -0.3
PDLIM7-210ENST00000503827 IFNL4K9M1U5 179 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 RNF13O43567 381 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 IGHG1P01857 330 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 ZNF32P17041 273 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 PRKAR1BP31321 381 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 BST1Q10588 318 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 PSG7Q13046 419 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 NLRC3Q7RTR2 1065 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 FITM2Q8N6M3 262 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 OR8B3Q8NGG8 313 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 VANGL1Q8TAA9 524 aaPredicted RBP13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 TCP10LQ8TDR4 215 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 GATAD2BQ8WXI9 593 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 MAGEB18Q96M61 343 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 OR8B2Q96RD0 313 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 ZBTB18Q99592 522 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 SIAEQ9HAT2 523 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 TPT1P8Q9HAU6 139 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 ELOVL3Q9HB03 270 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 TMEM165Q9HC07 324 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 MAN2C1Q9NTJ4 1040 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 ACOXLQ9NUZ1 547 aa13.18□□□□□ -0.3
PDLIM7-210ENST00000503827 A0A0B4J2E0 115 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 A0A1B0GX12 115 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 P2RY10O00398 339 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 IGHV4-59P01825 116 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 IL12AP29459 219 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 TAF11Q15544 211 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 OR1Q1Q15612 314 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 HIST3H3Q16695 136 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 C17orf53Q8N3J3 647 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 ZNF781Q8N8C0 355 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 AKR7LQ8NHP1 331 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 ZNF347Q96SE7 839 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 TRIM15Q9C019 465 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 NECAP2Q9NVZ3 263 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 TAS2R5Q9NYW4 299 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 CLN8Q9UBY8 286 aa13.17□□□□□ -0.3
PDLIM7-210ENST00000503827 C5orf58C9J3I9 102 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 ICMTO60725 284 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 SPAG7O75391 227 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 ZNF205O95201 554 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 BPGMP07738 259 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 GSTM3P21266 225 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 FUT4P22083 530 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 IER3P46695 156 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 PITPNBP48739 271 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 MMP16P51512 607 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 ARL9Q6T311 187 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 Q6ZR03 302 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 VASH1Q7L8A9 365 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 ALDH16A1Q8IZ83 802 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 UBLCP1Q8WVY7 318 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 LRTOMTQ8WZ04 291 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 SGCDQ92629 289 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 OR2V2Q96R30 315 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 TMEM246Q9BRR3 403 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 NUF2Q9BZD4 464 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 GCM1Q9NP62 436 aa13.16□□□□□ -0.3
PDLIM7-210ENST00000503827 CENPVL3A0A0U1RRI6 287 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 ITM2AO43736 263 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 ENSAO43768 121 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 ETS2P15036 469 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 CDH12P55289 794 aa13.15□□□□□ -0.3
PDLIM7-210ENST00000503827 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms