RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ACOXLQ9NUZ1 547 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 BABAM2Q9NXR7 383 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 SLCO1C1Q9NYB5 712 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 GLTPQ9NZD2 209 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CLCF1Q9UBD9 225 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 MRM2Q9UI43 246 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 RCE1Q9Y256 329 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 PCDHGB7Q9Y5F8 929 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 LHFPL6Q9Y693 200 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 SVILO95425 2214 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 A0A1B0GTH9 108 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 A0A1W2PPL8 197 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ZNF726A6NNF4 738 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ZNF670-ZNF695F2Z2N8 137 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 J3QLW9 94 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 AKAP8O43823 692 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 SRSF10O75494 262 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 HLA-DQA2P01906 255 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 MT-ND5P03915 603 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 HRGP04196 525 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 SPARCP09486 303 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ZNF19P17023 458 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ANOS1P23352 680 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 PSMB10P40306 273 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CENPAP49450 140 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 BLVRAP53004 296 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 UCNP55089 124 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 FOXG1P55316 489 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 FABP5Q01469 135 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 BDH1Q02338 343 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ROM1Q03395 351 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 NFATC3Q12968 1075 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ENDOGQ14249 297 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 INSL4Q14641 139 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 GUSBP1Q15486 140 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 INAQ16352 499 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 PRR30Q53SZ7 412 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 TEX30Q5JUR7 227 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 PDSS1Q5T2R2 415 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 DMKNQ6E0U4 476 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 DNM1P34Q6PK57 102 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CD200R1LQ6Q8B3 271 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CORO6Q6QEF8 472 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 TMPRSS11AQ6ZMR5 421 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 TMEM91Q6ZNR0 172 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CFAP77Q6ZQR2 320 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 SEM1Q6ZVN7 128 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 AAED1Q7RTV5 226 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 NUFIP2Q7Z417 695 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 HDDC2Q7Z4H3 204 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 LINC00346Q8IVM7 164 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 TUSC5Q8IXB3 177 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ZCCHC14Q8WYQ9 949 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 RGP1Q92546 391 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 UFD1Q92890 307 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 MAP6Q96JE9 813 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ALKBH3Q96Q83 286 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 RBP7Q96R05 134 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 OR8B4Q96RC9 309 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 TM9SF2Q99805 663 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 BCL7BQ9BQE9 202 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CHCHD6Q9BRQ6 235 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ABHD6Q9BV23 337 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 EXO5Q9H790 373 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 RNF122Q9H9V4 155 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 PNRC2Q9NPJ4 139 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 TIGARQ9NQ88 270 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ZNF71Q9NQZ8 489 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 POLE4Q9NR33 117 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CHCHD3Q9NX63 227 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 PTTG2Q9NZH5 202 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 KLHL9Q9P2J3 617 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CYB5R1Q9UHQ9 305 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CLEC4AQ9UMR7 237 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 CAMK2AQ9UQM7 478 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 PMF1-BGLAPU3KQ54 211 aa6.09□□□□□ -1.43
TOPBP1-203ENST00000503464 ZZEF1O43149 2961 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 LOC100506127A0A0U1RQW1 187 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SHISA3A0PJX4 238 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 METTL15A6NJ78 407 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC22A20A6NK97 555 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF724A8MTY0 619 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 OGG1O15527 345 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 DHHO43323 396 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 PLPP2O43688 288 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 AIREO43918 545 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC43A1O75387 559 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SC5DO75845 299 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 SYNGR4O95473 234 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 PNPP00491 289 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF182P17025 639 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 CELP19835 753 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 AGTR1P30556 359 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 GABRA5P31644 462 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 TDGF1P3P51864 188 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 RPS11P62280 158 aaKnown RBP eCLIP6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 ACTA2P62736 377 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 ACTG2P63267 376 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 EGR3Q06889 387 aa6.08□□□□□ -1.44
TOPBP1-203ENST00000503464 MFGE8Q08431 387 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms