RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RAB40BQ12829 278 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 STX5Q13190 355 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 EIF2B1Q14232 305 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 GRB7Q14451 532 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 LAGE3Q14657 143 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZSCAN26Q16670 478 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 RGS21Q2M5E4 152 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPEL1Q2QD12 228 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 RFTN2Q52LD8 501 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 UNC50Q53HI1 259 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CYBRD1Q53TN4 286 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PAN3Q58A45 887 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 EEF1A1P5Q5VTE0 462 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CTRB2Q6GPI1 263 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 ADNP2Q6IQ32 1131 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 WDR59Q6PJI9 974 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PRSS48Q7RTY5 328 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PRIMA1Q86XR5 153 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CRLF3Q8IUI8 442 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 APRG1Q8IVJ8 170 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 FAM71AQ8IYT1 594 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC39A11Q8N1S5 342 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 DEFB123Q8N688 67 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 RBMXL3Q8N7X1 1067 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR10V1Q8NGI7 309 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR1S2Q8NGQ3 325 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR4Q3Q8NH05 313 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 LGALS14Q8TCE9 139 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 APOBEC4Q8WW27 367 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMEM239Q8WW34 195 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 TOMM40LQ969M1 308 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 BIRC7Q96CA5 298 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 RAB3CQ96E17 227 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 OMA1Q96E52 524 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 DNAJA3Q96EY1 480 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZBED6CLQ96FA7 236 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF75AQ96N20 296 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 SELENOSQ9BQE4 189 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PLEKHA3Q9HB20 300 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC39A1Q9NY26 324 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 TAS2R16Q9NYV7 291 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 LSM7Q9UK45 103 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 YARS2Q9Y2Z4 477 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 DHRS7Q9Y394 339 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 UTP11Q9Y3A2 253 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 LRRC42Q9Y546 428 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 V9GYY9 64 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 ADGRA3Q8IWK6 1321 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 MYO9BQ13459 2157 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 FRYLO94915 3013 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF292O60281 2723 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 A0A0A6YYH2 397 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 A0A1W2PPI3 338 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMEM150BA6NC51 233 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 GOLGA6L10A6NI86 522 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 A6NJ64 397 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 ERI2A8K979 691 aaKnown RBP3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 INAFM1C9JVW0 142 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 F8VP50 259 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 GOSR2O14653 212 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 EMC8O43402 210 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 CTSVO60911 334 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR7A10O76100 309 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 RCBTB2O95199 551 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 TNFAIP8O95379 198 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 LSM8O95777 96 aaKnown RBP3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 HPP00738 406 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 ATP1A1P05023 1023 aaKnown RBP3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 GP1BAP07359 652 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 FRMD6-AS1P0C7T7 363 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 PSG1P11464 419 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 PSKH1P11801 424 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 GIFP27352 417 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 MARK3P27448 753 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 HLA-DMAP28067 261 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 RBM34P42696 430 aaKnown RBP3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR3A2P47893 321 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 RFX2P48378 723 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 ACOT2P49753 483 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPS14P62263 151 aaKnown RBP3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 MRPS22P82650 360 aaKnown RBP3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 PITPNAQ00169 270 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 PAX2Q02962 417 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 RBBP4Q09028 425 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 IFFO1Q0D2I5 559 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 SCRN3Q0VDG4 424 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 ST3GAL3Q11203 375 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 SRSF9Q13242 221 aaKnown RBP eCLIP3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 CASP8Q14790 479 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 KIR2DS3Q14952 304 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 TRIM16LQ309B1 348 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 NDUFAF6Q330K2 333 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 FAHD2BQ6P2I3 314 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 DCUN1D2Q6PH85 259 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 SYCE2Q6PIF2 218 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMPRSS11AQ6ZMR5 421 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 LINC00336Q6ZUF6 198 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC47A2Q86VL8 602 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 UNC93AQ86WB7 457 aa3.64□□□□□ -1.83
HMGB1P21-201ENST00000502313 IQCKQ8N0W5 287 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms