RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 GATA5Q9BWX5 397 aaPredicted RBP4.31□□□□□ -1.72
NF1-217ENST00000498569 RSPO3Q9BXY4 272 aaPredicted RBP4.31□□□□□ -1.72
NF1-217ENST00000498569 CHIAQ9BZP6 476 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 SLC38A1Q9H2H9 487 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 ARMC7Q9H6L4 198 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 RNF121Q9H920 327 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 NANOGQ9H9S0 305 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 RLIMQ9NVW2 624 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 ZNF224Q9NZL3 707 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 C1RLQ9NZP8 487 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 KIF17Q9P2E2 1029 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 B3GAT1Q9P2W7 334 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 RPS6KB2Q9UBS0 482 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 PFDN2Q9UHV9 154 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 GPR45Q9Y5Y3 372 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 NPTNQ9Y639 398 aa4.31□□□□□ -1.72
NF1-217ENST00000498569 DYNC2H1Q8NCM8 4307 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 CSMD3Q7Z407 3707 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 IQCMA0A1B0GVH7 501 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 A8MXK9 166 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 COPEO14579 308 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 OR2T1O43869 369 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 PIP5K1CO60331 668 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 PLIN3O60664 434 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 SNAP29O95721 258 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 PTHP01270 115 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 IGHV1-46P01743 117 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 IGHV3-13P01766 116 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 IGHV2-70P01814 119 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 ABHD2P08910 425 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 PPIAL4GP0DN37 164 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 G6PDP11413 515 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 RPS2P15880 293 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 RPS4Y1P22090 263 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 CCNOP22674 350 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 CBLP22681 906 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 TNFSF4P23510 183 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 GCAP28676 217 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 CASQ1P31415 396 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 APLNRP35414 380 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 RBMXP38159 391 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 CSNK1A1P48729 337 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 UCP2P55851 309 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 RPL15P61313 204 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 SEC61A1P61619 476 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 BTG1P62324 171 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 GNB2P62879 340 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 HSF2Q03933 536 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 CKAP4Q07065 602 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 LARS2Q15031 903 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 DEFB112Q30KQ8 113 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 BEAN1Q3B7T3 259 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 SLC36A2Q495M3 483 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 TTMPQ5BVD1 217 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 XKR7Q5GH72 579 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 VAX1Q5SQQ9 334 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 SPATA46Q5T0L3 261 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 FAM69AQ5T7M9 428 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 GPR157Q5UAW9 335 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 ANXA8L1Q5VT79 327 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 C5orf46Q6UWT4 87 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 LRRN1Q6UXK5 716 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 UNQ6126/PRO20091Q6UXV3 157 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 ZNF620Q6ZNG0 422 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 H1FNTQ75WM6 255 aaPredicted RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 PIWIL3Q7Z3Z3 882 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 SERPINA11Q86U17 422 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 ZNF584Q8IVC4 421 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 C10orf107Q8IVU9 208 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 SKA3Q8IX90 412 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 C20orf196Q8IYI0 205 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 LRRC34Q8IZ02 419 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 PAQR4Q8N4S7 273 aaPredicted RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 TRIML2Q8N7C3 387 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 OR8J2Q8NGG1 315 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 OR10S1Q8NGN2 331 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 OR1J1Q8NGS3 322 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 OR52P1PQ8NH57 321 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 IPCEF1Q8WWN9 437 aaPredicted RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 GEMIN6Q8WXD5 167 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 SLC38A4Q969I6 547 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 LRR1Q96L50 414 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 ZNF75AQ96N20 296 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 EMC6Q9BV81 110 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 SLC19A3Q9BZV2 496 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 MTHFD2LQ9H903 347 aaPredicted RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 PATZ1Q9HBE1 687 aaKnown RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 NOX4Q9NPH5 578 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 CYSLTR2Q9NS75 346 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 SLC6A13Q9NSD5 602 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 IL20RAQ9UHF4 553 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 PRDM4Q9UKN5 801 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 ZDHHC8Q9ULC8 765 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 ZNF443Q9Y2A4 671 aaPredicted RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 LRCH1Q9Y2L9 728 aa4.3□□□□□ -1.72
NF1-217ENST00000498569 SOX21Q9Y651 276 aaPredicted RBP4.3□□□□□ -1.72
NF1-217ENST00000498569 EPPK1P58107 5090 aaKnown RBP4.29□□□□□ -1.72
NF1-217ENST00000498569 TRAV36DV7A0A075B6V5 113 aa4.29□□□□□ -1.72
NF1-217ENST00000498569 IGHV2-70DA0A0C4DH43 119 aa4.29□□□□□ -1.72
NF1-217ENST00000498569 PRSS51A0A1B0GVH4 220 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms