RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 TPK1Q9H3S4 243 aa15.82■□□□□ 0.12
HOXD11-202ENST00000498438 MYEF2Q9P2K5 600 aaKnown RBP15.82■□□□□ 0.12
HOXD11-202ENST00000498438 IL20RAQ9UHF4 553 aa15.82■□□□□ 0.12
HOXD11-202ENST00000498438 TEX13CA0A0J9YWL9 993 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 SLC22A23A1A5C7 686 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 UNC119BA6NIH7 251 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 B2RBV5 119 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 VWC2LB2RUY7 222 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 M0R233 179 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 NDUFS8O00217 210 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 GADD45GO95257 159 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 LAP3P28838 519 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 ALDH3B1P43353 468 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 SMIM11AP58511 58 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 FXYD6P3P58550 94 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 KRR1Q13601 381 aaKnown RBP15.81■□□□□ 0.12
HOXD11-202ENST00000498438 RGS7BPQ6MZT1 257 aaPredicted RBP15.81■□□□□ 0.12
HOXD11-202ENST00000498438 CYP2R1Q6VVX0 501 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 AKR7LQ8NHP1 331 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 NEU4Q8WWR8 484 aaPredicted RBP15.81■□□□□ 0.12
HOXD11-202ENST00000498438 RASD2Q96D21 266 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 NSL1Q96IY1 281 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 GPX7Q96SL4 187 aaPredicted RBP15.81■□□□□ 0.12
HOXD11-202ENST00000498438 GPA33Q99795 319 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 LRMDAQ9H2I8 198 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 NRIP3Q9NQ35 241 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 ADAM21Q9UKJ8 722 aa15.81■□□□□ 0.12
HOXD11-202ENST00000498438 LOC390937A0A1W2PQ73 354 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 PRSS37A4D1T9 235 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 CST2P09228 141 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 DAOP14920 347 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 ATP6V1B2P21281 511 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 MSR1P21757 451 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 USF1P22415 310 aaPredicted RBP15.8■□□□□ 0.12
HOXD11-202ENST00000498438 STOMP27105 288 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 SDHAP31040 664 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 GUCA1AP43080 201 aaPredicted RBP15.8■□□□□ 0.12
HOXD11-202ENST00000498438 NR4A2P43354 598 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 ERVS71-1P61550 626 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 GGTLC2Q14390 218 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 MAD2L1BPQ15013 274 aaPredicted RBP15.8■□□□□ 0.12
HOXD11-202ENST00000498438 FOXN4Q96NZ1 517 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 OR2H1Q9GZK4 316 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 IL1RAPQ9NPH3 570 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 REV1Q9UBZ9 1251 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 DUSP13Q9UII6 198 aa15.8■□□□□ 0.12
HOXD11-202ENST00000498438 A0A1W2PPW3 197 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 TLX2O43763 284 aaPredicted RBP15.79■□□□□ 0.12
HOXD11-202ENST00000498438 SCG5P05408 212 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 LCKP06239 509 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 CCNOP22674 350 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 RRM2P31350 389 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 UCP2P55851 309 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 PSG4Q00888 419 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 ENDOGQ14249 297 aaKnown RBP15.79■□□□□ 0.12
HOXD11-202ENST00000498438 GPR139Q6DWJ6 353 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 ZER1Q7Z7L7 766 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 ZDHHC21Q8IVQ6 265 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 ICA1LQ8NDH6 482 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 FANK1Q8TC84 345 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 ZNF416Q9BWM5 594 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 BCL2L14Q9BZR8 327 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 BPESC1Q9GZL8 116 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 WNT5BQ9H1J7 359 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 POLE4Q9NR33 117 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 YAE1D1Q9NRH1 226 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 ACTR3BQ9P1U1 418 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 IER3IP1Q9Y5U9 82 aa15.79■□□□□ 0.12
HOXD11-202ENST00000498438 LOC100509620A0A075B734 347 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 SOCS2O14508 198 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 AHCYL1O43865 530 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 OR10H3O60404 316 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 STAMBPO95630 424 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 CLPTM1O96005 669 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 CTLA4P16410 223 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 CALB2P22676 271 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 WNT5AP41221 380 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 RAD52P43351 418 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 PCBD1P61457 104 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 SMARCD3Q6STE5 483 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 UGT2A3Q6UWM9 527 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 DPY19L2P2Q6ZN68 376 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 RINLQ6ZS11 566 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 POM121L2Q96KW2 1035 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 SYT4Q9H2B2 425 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 MS4A5Q9H3V2 200 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 EMC7Q9NPA0 242 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 TIMM10BQ9Y5J6 103 aa15.78■□□□□ 0.12
HOXD11-202ENST00000498438 C5orf49A4QMS7 147 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 IMPA2O14732 288 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 T-ENOLP0DO92 83 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 ZNF250P15622 560 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 FPR3P25089 353 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 GDI2P50395 445 aaKnown RBP15.77■□□□□ 0.12
HOXD11-202ENST00000498438 RPS6KA3P51812 740 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 KLF3P57682 345 aaPredicted RBP15.77■□□□□ 0.12
HOXD11-202ENST00000498438 NKPD1Q17RQ9 610 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 ALKBH6Q3KRA9 238 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 MTX3Q5HYI7 312 aa15.77■□□□□ 0.12
HOXD11-202ENST00000498438 C6orf52Q5T4I8 152 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms