RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CRMP1Q14194 572 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 PON3Q15166 354 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 TOMM20Q15388 145 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 MOGQ16653 247 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 TIGD6Q17RP2 521 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 PLPPR5Q32ZL2 321 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 TIMM50Q3ZCQ8 353 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 ARMCX4Q5H9R4 360 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF362Q5T0B9 420 aaPredicted RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 PRAMEF20Q5VT98 475 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 SP5Q6BEB4 398 aaPredicted RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 NIPAL3Q6P499 406 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 ARSKQ6UWY0 536 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 TMPRSS11AQ6ZMR5 421 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 H1FNTQ75WM6 255 aaPredicted RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 BCDIN3DQ7Z5W3 292 aaKnown RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 IGFN1Q86VF2 1251 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 NANOGP1Q8N7R0 232 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 SCAIQ8N9R8 606 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 WDSUB1Q8N9V3 476 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC37A3Q8NCC5 494 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 ATP6V1C2Q8NEY4 427 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 OR4K13Q8NH42 304 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 MOSPD2Q8NHP6 518 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 PSMF1Q92530 271 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 PTP4A1Q93096 173 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 C12orf43Q96C57 262 aaKnown RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 ISOC1Q96CN7 298 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 NTNG2Q96CW9 530 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 LGALS12Q96DT0 336 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 C1GALT1C1Q96EU7 318 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 MRPL48Q96GC5 212 aaKnown RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 JSRP1Q96MG2 331 aaPredicted RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 COG8Q96MW5 612 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 MOGAT1Q96PD6 335 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 SNX18Q96RF0 628 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 RHNO1Q9BSD3 238 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 KATNB1Q9BVA0 655 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 FUNDC2Q9BWH2 189 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 OR51V1Q9H2C8 321 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 ISYNA1Q9NPH2 558 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 INPP5EQ9NRR6 644 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 INIPQ9NRY2 104 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 MRPL39Q9NYK5 338 aaKnown RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 HAO2Q9NYQ3 351 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 LRFN1Q9P244 771 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 DKKL1Q9UK85 242 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF346Q9UL40 294 aaKnown RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 TRAPPC4Q9Y296 219 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 MRPS18CQ9Y3D5 142 aaKnown RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 HDGFL3Q9Y3E1 203 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 MRPS18BQ9Y676 258 aaKnown RBP4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 HEATR5AQ86XA9 2040 aa4.73□□□□□ -1.65
HMGXB4-208ENST00000498325 SDK2Q58EX2 2172 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 TRBV23-1A0A0A0MS06 115 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 TMEM129A0AVI4 362 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 DAPL1A0PJW8 107 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 A6NIZ1 184 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 FAM183AA6NL82 134 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 GJE1A6NN92 205 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 C17orf51A8MQB3 221 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 CENPBD1B2RD01 187 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 FTCDNL1E5RQL4 147 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 C11orf98E9PRG8 122 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 H3BMQ9 156 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 CCRL2O00421 344 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 PLPP3O14495 311 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ARHGEF9O43307 516 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 GLCEO94923 617 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 PTHP01270 115 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 LCKP06239 509 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 SBK2P0C263 348 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 HSMCR30P0CW71 290 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 LIFP15018 202 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 CD36P16671 472 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF17P17021 662 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC2A5P22732 501 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 PCSK6P29122 969 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 SRD5A2P31213 254 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 BLVRAP53004 296 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC25A1P53007 311 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 WNT4P56705 351 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 OR2B6P58173 313 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 RAP1BP61224 184 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 RPL27P61353 136 aaKnown RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 RAP1AP62834 184 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 CSNK2A1P68400 391 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC35A1P78382 337 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 MLLT11Q13015 90 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 KRR1Q13601 381 aaKnown RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 SPHARQ15513 63 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 OR7A5Q15622 319 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 INPP5JQ15735 1006 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 PDSS1Q5T2R2 415 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 AGAP7PQ5VUJ5 663 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 FAM205BPQ63HN1 556 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 B3GNTL1Q67FW5 361 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 LEG1Q6P5S2 330 aa4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 NCCRP1Q6ZVX7 275 aaPredicted RBP4.72□□□□□ -1.65
HMGXB4-208ENST00000498325 FAM122BQ7Z309 247 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms