RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ZNF443Q9Y2A4 671 aaPredicted RBP5.59□□□□□ -1.52
SSBP1-213ENST00000496622 MRPS18BQ9Y676 258 aaKnown RBP5.59□□□□□ -1.52
SSBP1-213ENST00000496622 DSPPQ9NZW4 1301 aa5.59□□□□□ -1.52
SSBP1-213ENST00000496622 OR14I1A6ND48 311 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CXorf65A6NEN9 183 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CBY3A6NI87 242 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF716A6NP11 495 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 RFPL3O75679 317 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 MT-ND2P03891 347 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CRYGCP07315 174 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF735P0CB33 412 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ITGAMP11215 1152 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 TDGF1P13385 188 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 RAB3BP20337 219 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 MC5RP33032 325 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF136P52737 540 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 SLC35A2P78381 396 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 PLA2G7Q13093 441 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 SKP2Q13309 424 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 TNK1Q13470 666 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ARHGAP11BQ3KRB8 267 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 GXYLT1Q4G148 440 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 NXNL2Q5VZ03 156 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 PWWP2BQ6NUJ5 590 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 SMARCD3Q6STE5 483 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CBLN3Q6UW01 205 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ATRAIDQ6UW56 229 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 C6orf15Q6UXA7 325 aaPredicted RBP5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF730Q6ZMV8 503 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 SPAG16Q8N0X2 631 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 FAM89BQ8N5H3 189 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 TCEANCQ8N8B7 351 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CDRT4Q8N9R6 151 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 MORN4Q8NDC4 146 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 OR10H4Q8NGA5 316 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 OR5M3Q8NGP4 307 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 PFN4Q8NHR9 129 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 RPL3LQ92901 407 aaKnown RBP5.58□□□□□ -1.52
SSBP1-213ENST00000496622 RDH12Q96NR8 316 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 DGAT2Q96PD7 388 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 INTS14Q96SY0 518 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 MRI1Q9BV20 369 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF350Q9GZX5 532 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 OR10A5Q9H207 317 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 MTHFD2LQ9H903 347 aaPredicted RBP5.58□□□□□ -1.52
SSBP1-213ENST00000496622 LANCL2Q9NS86 450 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 OCIAD1Q9NX40 245 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 RDH8Q9NYR8 311 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 PTGFRNQ9P2B2 879 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 OR10H1Q9Y4A9 318 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 PNMA8CA0A1B0GUJ8 204 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CCSO14618 274 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 LRRTM2O43300 516 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 TLX2O43763 284 aaPredicted RBP5.58□□□□□ -1.52
SSBP1-213ENST00000496622 PRKYO43930 277 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 SOX15O60248 233 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 TSPAN2O60636 221 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 FAM20BO75063 409 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ITGA10O75578 1167 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 AHSA1O95433 338 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 SLC2A10O95528 541 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CLEC3BP05452 202 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ADORA3P0DMS8 318 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 IFNGR1P15260 489 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CRISP1P54107 249 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 GP2P55259 537 aaKnown RBP5.58□□□□□ -1.52
SSBP1-213ENST00000496622 TSPAN31Q12999 210 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 NDUFA9Q16795 377 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CHRFAM7AQ494W8 412 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 PHF19Q5T6S3 580 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF773Q6PK81 442 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 PAQR6Q6TCH4 344 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 APOOLQ6UXV4 268 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 SHFQ7M4L6 423 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 GDF7Q7Z4P5 450 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 GCNT2Q8N0V5 402 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 GHDCQ8N2G8 530 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 GPR137CQ8N3F9 429 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 OR8D4Q8NGM9 314 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 RHOXF1Q8NHV9 184 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CACNG8Q8WXS5 425 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 DIO2Q92813 273 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 OTULINQ96BN8 352 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 C8orf44Q96CB5 159 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF501Q96CX3 271 aaPredicted RBP5.58□□□□□ -1.52
SSBP1-213ENST00000496622 VSTM2LQ96N03 204 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 APOL4Q9BPW4 351 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 FUZQ9BT04 418 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 TMEM208Q9BTX3 173 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 GABARAPL3Q9BY60 117 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 NXF5Q9H1B4 397 aaKnown RBP5.58□□□□□ -1.52
SSBP1-213ENST00000496622 CHST11Q9NPF2 352 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 HIF1ANQ9NWT6 349 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 NTMQ9P121 344 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 STUB1Q9UNE7 303 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 HSPB11Q9Y547 144 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 TMEM131Q92545 1883 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 FER1L5A0AVI2 2057 aa5.58□□□□□ -1.52
SSBP1-213ENST00000496622 C2CD3Q4AC94 2353 aa5.57□□□□□ -1.52
SSBP1-213ENST00000496622 IGHV5-10-1A0A0J9YXX1 117 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms