RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 ANKRD9Q96BM1 317 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-215ENST00000496447 TAAR9Q96RI9 348 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 MED18Q9BUE0 208 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 UBQLN3Q9H347 655 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 AGPAT2O15120 278 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 TO15178 435 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 NID1P14543 1247 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 FXNQ16595 210 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 RNF212Q495C1 297 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 RNLSQ5VYX0 342 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 LPCAT3Q6P1A2 487 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 TMEM200AQ86VY9 491 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 WDR5BQ86VZ2 330 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 SEMA6DQ8NFY4 1073 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 LGALS14Q8TCE9 139 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 PCNPQ8WW12 178 aaKnown RBP12.03□□□□□ -0.48
PTPRF-215ENST00000496447 ZNF419Q96HQ0 510 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-215ENST00000496447 DCLRE1CQ96SD1 692 aaKnown RBP12.03□□□□□ -0.48
PTPRF-215ENST00000496447 CRLF2Q9HC73 371 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 NDRG3Q9UGV2 375 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 ARHGAP33O14559 1287 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 OR2J2O76002 312 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 RAD52P43351 418 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 GPR3P46089 330 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 HTD2P86397 168 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 MFGE8Q08431 387 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-215ENST00000496447 SPEM2Q0P670 501 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 SLC22A25Q6T423 547 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.03□□□□□ -0.48
PTPRF-215ENST00000496447 LIN37Q96GY3 246 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-215ENST00000496447 PKMYT1Q99640 499 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 NIPSNAP1Q9BPW8 284 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 AKIP1Q9NQ31 210 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 PPT2Q9UMR5 302 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 DIMT1Q9UNQ2 313 aaKnown RBP12.03□□□□□ -0.48
PTPRF-215ENST00000496447 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 SPTY2D1-AS1A0A0U1RR47 76 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 ICOSLGO75144 302 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 SLC2A1P11166 492 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 TGM4P49221 684 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 YIF1BQ5BJH7 314 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 CD300LGQ6UXG3 332 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 MYEOVQ96EZ4 313 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 RNF170Q96K19 258 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 GALNT9Q9HCQ5 603 aa12.03□□□□□ -0.48
PTPRF-215ENST00000496447 A0A1W2PNR3 127 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 LMO7DNF2Z398 122 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 TMPRSS11DO60235 418 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 RAF1P04049 648 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 NAXDQ8IW45 347 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 KCNE4Q8WWG9 221 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 SLAMF9Q96A28 289 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 ABHD6Q9BV23 337 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 TEX101Q9BY14 249 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 LAT2Q9GZY6 243 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 TUBB1Q9H4B7 451 aa12.02□□□□□ -0.48
PTPRF-215ENST00000496447 SLC6A12P48065 614 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 AGFG1P52594 562 aaKnown RBP12.02□□□□□ -0.49
PTPRF-215ENST00000496447 AKR1C1Q04828 323 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 DAZAP1Q96EP5 407 aaKnown RBP12.02□□□□□ -0.49
PTPRF-215ENST00000496447 FYTTD1Q96QD9 318 aaKnown RBP12.02□□□□□ -0.49
PTPRF-215ENST00000496447 CHST8Q9H2A9 424 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 PIGMQ9H3S5 423 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 WNT16Q9UBV4 365 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 PSORS1C1Q9UIG5 152 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 DEGS1O15121 323 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 SHC1P29353 583 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 NKAIN3Q8N8D7 197 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 OR1M1Q8NGA1 313 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 LRRC61Q9BV99 259 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 TIMM10BQ9Y5J6 103 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 M0R1B8 84 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 MSTNO14793 375 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 THBS1P07996 1170 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 QDPRP09417 244 aa12.02□□□□□ -0.49
PTPRF-215ENST00000496447 POLR2IP36954 125 aaKnown RBP12.02□□□□□ -0.49
PTPRF-215ENST00000496447 RBMXL3Q8N7X1 1067 aaKnown RBP12.02□□□□□ -0.49
PTPRF-215ENST00000496447 INTS12Q96CB8 462 aaKnown RBP12.02□□□□□ -0.49
PTPRF-215ENST00000496447 SLC22A23A1A5C7 686 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 SLC16A6O15403 523 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 LGI1O95970 557 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 ZNF728P0DKX0 622 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 BRICD5Q6PL45 260 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 MAVSQ7Z434 540 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 NKAIN4Q8IVV8 208 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 PELI3Q8N2H9 469 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 MARC2Q969Z3 335 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 A0A1W2PS29 197 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 SMLR1H3BR10 107 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 HMGN4O00479 90 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 KLK10O43240 276 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 SCG5P05408 212 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 TAS2R30P59541 319 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 XKR7Q5GH72 579 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 KHDC1LQ5JSQ8 128 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 ST7LQ8TDW4 575 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 C1orf123Q9NWV4 160 aa12.01□□□□□ -0.49
PTPRF-215ENST00000496447 RPH3ALQ9UNE2 315 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms