RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CPEB3Q8NE35 698 aaKnown RBP20.78■□□□□ 0.92
HLA-C-209ENST00000495835 OR13C2Q8NGS9 318 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 TPK1Q9H3S4 243 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 KCNS2Q9ULS6 477 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 TIMM10BQ9Y5J6 103 aa20.78■□□□□ 0.92
HLA-C-209ENST00000495835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.78■□□□□ 0.92
HLA-C-209ENST00000495835 DNHD1Q96M86 4753 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 A0A1W2PPW3 197 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 XKRYO14609 159 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 CDC42EP2O14613 210 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 PTP4A3O75365 173 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 LCKP06239 509 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 FAM157BP0CG42 384 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 CCL2P13500 99 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 ACHEP22303 614 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 ALDH3B1P43353 468 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 KRT72Q14CN4 511 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 RDH5Q92781 318 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 MSI2Q96DH6 328 aaKnown RBP20.77■□□□□ 0.92
HLA-C-209ENST00000495835 POM121L2Q96KW2 1035 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 BEX2Q9BXY8 128 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 CHODLQ9H9P2 273 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 NDE1Q9NXR1 346 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 NKIRAS2Q9NYR9 191 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 MYEF2Q9P2K5 600 aaKnown RBP20.77■□□□□ 0.92
HLA-C-209ENST00000495835 EIF3KQ9UBQ5 218 aaKnown RBP20.77■□□□□ 0.92
HLA-C-209ENST00000495835 MAGEL2Q9UJ55 1249 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 ARL2BPQ9Y2Y0 163 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 MALRD1Q5VYJ5 2156 aa20.77■□□□□ 0.92
HLA-C-209ENST00000495835 ATRQ13535 2644 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 LOC100289279A0A1B0GTE1 492 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 ICMTO60725 284 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 LILRA1O75019 489 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 NDUFB2O95178 105 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 ZNF16P17020 682 aaPredicted RBP20.76■□□□□ 0.91
HLA-C-209ENST00000495835 GPR4P46093 362 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 TMEM33P57088 247 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 SMIM11AP58511 58 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 PSG4Q00888 419 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 NKPD1Q17RQ9 610 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 PCGF3Q3KNV8 242 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 SAMD4BQ5PRF9 694 aaKnown RBP20.76■□□□□ 0.91
HLA-C-209ENST00000495835 ELFN2Q5R3F8 820 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 GPR139Q6DWJ6 353 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 PIGWQ7Z7B1 504 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 PGAM4Q8N0Y7 254 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 DHRS1Q96LJ7 313 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 LRRC37BQ96QE4 947 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 GPX7Q96SL4 187 aaPredicted RBP20.76■□□□□ 0.91
HLA-C-209ENST00000495835 TAAR3PQ9P1P4 343 aa20.76■□□□□ 0.91
HLA-C-209ENST00000495835 FBN1P35555 2871 aaKnown RBP20.75■□□□□ 0.91
HLA-C-209ENST00000495835 C12orf71A8MTZ7 269 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 DCTN3O75935 186 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 IGHV3-13P01766 116 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 MSR1P21757 451 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 LAP3P28838 519 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 LIMS1P48059 325 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 GDI2P50395 445 aaKnown RBP20.75■□□□□ 0.91
HLA-C-209ENST00000495835 ERVK-25P63136 954 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 FAM122BQ7Z309 247 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 MEX3DQ86XN8 651 aaKnown RBP20.75■□□□□ 0.91
HLA-C-209ENST00000495835 SNX33Q8WV41 574 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 C1orf159Q96HA4 380 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 PYURFQ96I23 114 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 OR2H1Q9GZK4 316 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 SHARPINQ9H0F6 387 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 NRIP3Q9NQ35 241 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 TAGLN3Q9UI15 199 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 FZR1Q9UM11 496 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 SIGLEC7Q9Y286 467 aa20.75■□□□□ 0.91
HLA-C-209ENST00000495835 MXRA5Q9NR99 2828 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 C17orf100A8MU93 164 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 H3BSA7 217 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 MT-ND5P03915 603 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 THBS2P35442 1172 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 OMPP47874 163 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 MAD2L1BPQ15013 274 aaPredicted RBP20.74■□□□□ 0.91
HLA-C-209ENST00000495835 FGD3Q5JSP0 725 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 TMEM154Q6P9G4 183 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 CLDN22Q8N7P3 220 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 OR1J1Q8NGS3 322 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 FAM46AQ96IP4 442 aaKnown RBP20.74■□□□□ 0.91
HLA-C-209ENST00000495835 ZNF570Q96NI8 536 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 HINT3Q9NQE9 182 aaKnown RBP20.74■□□□□ 0.91
HLA-C-209ENST00000495835 CD300AQ9UGN4 299 aa20.74■□□□□ 0.91
HLA-C-209ENST00000495835 PRSS37A4D1T9 235 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 C5orf49A4QMS7 147 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 CLPTM1O96005 669 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 HPXP02790 462 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 COX5BP10606 129 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 ZNF26P17031 533 aaPredicted RBP20.73■□□□□ 0.91
HLA-C-209ENST00000495835 TCN1P20061 433 aaPredicted RBP20.73■□□□□ 0.91
HLA-C-209ENST00000495835 CCNOP22674 350 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 SDHAP31040 664 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 MNAT1P51948 309 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 GNGT1P63211 74 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 ZNF718Q3SXZ3 478 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 MESTQ5EB52 335 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 ARL9Q6T311 187 aa20.73■□□□□ 0.91
HLA-C-209ENST00000495835 RNF148Q8N7C7 305 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms