RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 PGGHGQ32M88 737 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PHYHD1Q5SRE7 291 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 LPCAT4Q643R3 524 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 CXorf67Q86X51 503 aaPredicted RBP8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SYT14Q8NB59 555 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 OR4Q3Q8NH05 313 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 RBP7Q96R05 134 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 HDHD5Q9BXW7 423 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 CRLF2Q9HC73 371 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 GPR35Q9HC97 309 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 C8orf4Q9NR00 106 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 TAS2R16Q9NYV7 291 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 NKX1-2Q9UD57 310 aaPredicted RBP8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 KLHL21Q9UJP4 597 aa8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 KLF2Q9Y5W3 355 aaPredicted RBP8.88□□□□□ -0.99
RAB11FIP3-211ENST00000495663 CIB4A0PJX0 185 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PRSS37A4D1T9 235 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 C16orf97H3BN30 126 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 H7C1C5 153 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 LYZL6O75951 148 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ATP6V1G2O95670 118 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 RENP00797 406 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 IFNGP01579 166 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 HMGN1P05114 100 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ITGA5P08648 1049 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 QDPRP09417 244 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 HIST1H1CP16403 213 aaKnown RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PSMB1P20618 241 aaKnown RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 IL32P24001 234 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PEX2P28328 305 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PEX19P40855 299 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 CDKN2AP42771 156 aaKnown RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ZNF84P51523 738 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SLURP1P55000 103 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SH3BGRP55822 239 aaPredicted RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 LCN6P62502 163 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SORDQ00796 357 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 NPRL3Q12980 569 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 STK11Q15831 433 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 CEACAM16Q2WEN9 425 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 THEM4Q5T1C6 240 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SLC35F1Q5T1Q4 408 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 OGFRL1Q5TC84 451 aaPredicted RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 C9orf135Q5VTT2 229 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ACSM5Q6NUN0 579 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 LEG1Q6P5S2 330 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 STAC2Q6ZMT1 411 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PTCHD4Q6ZW05 846 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 LINGO2Q7L985 606 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 IQCF1Q8N6M8 205 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PACRGLQ8N7B6 248 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ZNF433Q8N7K0 673 aaPredicted RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SDR9C7Q8NEX9 313 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 STEAP2Q8NFT2 490 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 OR52E2Q8NGJ4 325 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 OR4K13Q8NH42 304 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 KISS1RQ969F8 398 aaPredicted RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 MCHR2Q969V1 340 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SNX18Q96RF0 628 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SLC29A1Q99808 456 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 GABARAPL3Q9BY60 117 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PRRG3Q9BZD7 231 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 VCXQ9H320 206 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 RIBC2Q9H4K1 309 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SLC25A19Q9HC21 320 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 VSX1Q9NZR4 365 aaPredicted RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 GPR52Q9Y2T5 361 aa8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 USP9XQ93008 2570 aaPredicted RBP8.87□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SLC22A23A1A5C7 686 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 RIIAD1A6NNX1 92 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ZAR1LA6NP61 321 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ZNF99A8MXY4 864 aaPredicted RBP8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PRSS44E7EML9 344 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 DHHO43323 396 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 RAD51DO75771 328 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SLC2A10O95528 541 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ZNF3P17036 446 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 CRABP1P29762 137 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 UGT2B10P36537 528 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 ZNF133P52736 654 aaPredicted RBP8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 FOXG1P55316 489 aaPredicted RBP8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 FMODQ06828 376 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 C10orf128Q5T292 105 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 TMEM236Q5W0B7 351 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 OR7E24Q6IFN5 339 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 DNM1P34Q6PK57 102 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SLC25A47Q6Q0C1 308 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 BHLHA15Q7RTS1 189 aaPredicted RBP8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 GALNT4Q8N4A0 578 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 C1orf162Q8NEQ5 155 aaPredicted RBP8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 NMD3Q96D46 503 aaKnown RBP8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 PLEKHA8Q96JA3 519 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 RDH12Q96NR8 316 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SLC38A2Q96QD8 506 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 NMNAT3Q96T66 252 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 FOXB1Q99853 325 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 OR10A4Q9H209 315 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 SYT4Q9H2B2 425 aa8.86□□□□□ -0.99
RAB11FIP3-211ENST00000495663 CMC2Q9NRP2 79 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms