RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 AKR7LQ8NHP1 331 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 VANGL1Q8TAA9 524 aaPredicted RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 ADAMTS16Q8TE57 1224 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 SPDL1Q96EA4 605 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 MPP4Q96JB8 637 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 POM121L2Q96KW2 1035 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 C1orf147Q96MC9 270 aaPredicted RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 ZNF48Q96MX3 618 aaPredicted RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 ARHGDIGQ99819 225 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 NANOGQ9H9S0 305 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 ELOVL3Q9HB03 270 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 MSL2Q9HCI7 577 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 TMEM106BQ9NUM4 274 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 VAPAQ9P0L0 249 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 SLAMF8Q9P0V8 285 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 STX18Q9P2W9 335 aaKnown RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 POLR3KQ9Y2Y1 108 aaPredicted RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 PKD1L1Q8TDX9 2849 aa12.02□□□□□ -0.48
VARS-228ENST00000495010 TRAPPC13A5PLN9 417 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 H3BSA7 217 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 TRMUO75648 421 aaKnown RBP12.02□□□□□ -0.49
VARS-228ENST00000495010 SLC2A10O95528 541 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 GPANK1O95872 356 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 OPN1SWP03999 348 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 ASAH2BP0C7U1 165 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 NR2C1P13056 603 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 GPX2P18283 190 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 MDKP21741 143 aaPredicted RBP12.02□□□□□ -0.49
VARS-228ENST00000495010 GUCA1AP43080 201 aaPredicted RBP12.02□□□□□ -0.49
VARS-228ENST00000495010 SLC6A9P48067 706 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 WDR4P57081 412 aaKnown RBP12.02□□□□□ -0.49
VARS-228ENST00000495010 TUSC1Q2TAM9 212 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 TMEM155Q4W5P6 130 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 MTX3Q5HYI7 312 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 C10orf128Q5T292 105 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 WDR93Q6P2C0 686 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 C17orf107Q6ZR85 190 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 MAVSQ7Z434 540 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 OR6T1Q8NGN1 323 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 SLC26A7Q8TE54 656 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 ASB10Q8WXI3 467 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 NSMAFQ92636 917 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 TMIGD2Q96BF3 282 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 MRPL13Q9BYD1 178 aaKnown RBP12.02□□□□□ -0.49
VARS-228ENST00000495010 INIPQ9NRY2 104 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 CCDC167Q9P0B6 97 aa12.02□□□□□ -0.49
VARS-228ENST00000495010 LOC100509620A0A075B734 347 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 IGHV3OR16-10A0A075B7F0 116 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 TMEM120BA0PK00 339 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 GMNCA6NCL1 334 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 M0QX08 132 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 POLR3GO15318 223 aaPredicted RBP12.01□□□□□ -0.49
VARS-228ENST00000495010 TGDSO95455 350 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 KNG1P01042 644 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 CRYBA1P05813 215 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 CD247P20963 164 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 GSTM3P21266 225 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 OMGP23515 440 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 UGT2B15P54855 530 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 SEC61A1P61619 476 aaKnown RBP12.01□□□□□ -0.49
VARS-228ENST00000495010 BTG1P62324 171 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 ERVK-25P63136 954 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 PSG4Q00888 419 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 RPL18Q07020 188 aaKnown RBP12.01□□□□□ -0.49
VARS-228ENST00000495010 CD47Q08722 323 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 NPTX1Q15818 432 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 DUSP7Q16829 419 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 CYP51A1Q16850 503 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 PAGE3Q5JUK9 113 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 C16orf87Q6PH81 154 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 BLOC1S3Q6QNY0 202 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 RFPL4BQ6ZWI9 263 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 LRRC28Q86X40 367 aaPredicted RBP12.01□□□□□ -0.49
VARS-228ENST00000495010 PARP8Q8N3A8 854 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 C11orf65Q8NCR3 313 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 TAF15Q92804 592 aaKnown RBP eCLIP12.01□□□□□ -0.49
VARS-228ENST00000495010 DCAF16Q9NXF7 216 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 NKIRAS1Q9NYS0 192 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 KLHL21Q9UJP4 597 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 USH1CQ9Y6N9 552 aa12.01□□□□□ -0.49
VARS-228ENST00000495010 A0A1B0GUS0 222 aa12□□□□□ -0.49
VARS-228ENST00000495010 A8MXK9 166 aa12□□□□□ -0.49
VARS-228ENST00000495010 SURF4O15260 269 aa12□□□□□ -0.49
VARS-228ENST00000495010 THY1P04216 161 aa12□□□□□ -0.49
VARS-228ENST00000495010 FUT1P19526 365 aa12□□□□□ -0.49
VARS-228ENST00000495010 MDH2P40926 338 aaKnown RBP12□□□□□ -0.49
VARS-228ENST00000495010 ZNF133P52736 654 aaPredicted RBP12□□□□□ -0.49
VARS-228ENST00000495010 PCBD1P61457 104 aa12□□□□□ -0.49
VARS-228ENST00000495010 CDK5R2Q13319 367 aa12□□□□□ -0.49
VARS-228ENST00000495010 SPRNQ5BIV9 151 aa12□□□□□ -0.49
VARS-228ENST00000495010 TNFAIP8L3Q5GJ75 292 aa12□□□□□ -0.49
VARS-228ENST00000495010 TMEM255AQ5JRV8 349 aa12□□□□□ -0.49
VARS-228ENST00000495010 EPGNQ6UW88 154 aa12□□□□□ -0.49
VARS-228ENST00000495010 LRRN1Q6UXK5 716 aa12□□□□□ -0.49
VARS-228ENST00000495010 JAZF1Q86VZ6 243 aa12□□□□□ -0.49
VARS-228ENST00000495010 RBM45Q8IUH3 476 aaKnown RBP12□□□□□ -0.49
VARS-228ENST00000495010 MUC20Q8N307 709 aaPredicted RBP12□□□□□ -0.49
VARS-228ENST00000495010 OR2Z1Q8NG97 314 aa12□□□□□ -0.49
VARS-228ENST00000495010 ZDHHC16Q969W1 377 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms