RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ZNF133P52736 654 aaPredicted RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 KLF3P57682 345 aaPredicted RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 SELENOVP59797 346 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 PSME3P61289 254 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 LCN6P62502 163 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 CCL8P80075 99 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 MRPS34P82930 218 aaKnown RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 PSG4Q00888 419 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 GLO1Q04760 184 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 FHL1Q13642 323 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 TSTQ16762 297 aaKnown RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 CR1LQ2VPA4 569 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 IFI44LQ53G44 452 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 SPATA46Q5T0L3 261 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 THEM4Q5T1C6 240 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 GLYATQ6IB77 296 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 C8orf82Q6P1X6 216 aaPredicted RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 ZNF730Q6ZMV8 503 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 RRM2BQ7LG56 351 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 HDDC2Q7Z4H3 204 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 DPPA2Q7Z7J5 298 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 RNF148Q8N7C7 305 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 LINC01356Q8N9X3 169 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 OR13C2Q8NGS9 318 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 ZNF519Q8TB69 540 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 GTF3AQ92664 365 aaKnown RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 NMD3Q96D46 503 aaKnown RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 HSH2DQ96JZ2 352 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 DMRTB1Q96MA1 342 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 FAM107BQ9H098 131 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 C1orf198Q9H425 327 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 TREM2Q9NZC2 230 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 STX18Q9P2W9 335 aaKnown RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 TMEFF2Q9UIK5 374 aaPredicted RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 WNK2Q9Y3S1 2297 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 DYSFO75923 2080 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 LOC100509620A0A075B734 347 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 C17orf100A8MU93 164 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 CDC42EP2O14613 210 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 DIRAS1O95057 198 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 ZNF250P15622 560 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 DRD4P21917 467 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 RPL4P36578 427 aaKnown RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 WNT5AP41221 380 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 GUCA1AP43080 201 aaPredicted RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 GDI2P50395 445 aaKnown RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 TAF11Q15544 211 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 NRN1LQ496H8 165 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 AVPI1Q5T686 147 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 FAM27BQ5VT28 67 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 OTPQ5XKR4 325 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 ZNF774Q6NX45 483 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 TMEM154Q6P9G4 183 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 UGT2A3Q6UWM9 527 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 MBOAT2Q6ZWT7 520 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 TSEN54Q7Z6J9 526 aaKnown RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 ARPINQ7Z6K5 226 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 ALDH16A1Q8IZ83 802 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 ZNF101Q8IZC7 436 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 RNF113BQ8IZP6 322 aaKnown RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 OFCC1Q8IZS5 231 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 CLDND2Q8NHS1 167 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 GEMIN6Q8WXD5 167 aaKnown RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 ACOT11Q8WXI4 607 aaPredicted RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 TMEM158Q8WZ71 300 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 POM121L2Q96KW2 1035 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 KCTD14Q9BQ13 255 aaPredicted RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 ALG12Q9BV10 488 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 BCL2L14Q9BZR8 327 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 RERGLQ9H628 205 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 NMNAT1Q9HAN9 279 aaPredicted RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 LPAR2Q9HBW0 351 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 EMC7Q9NPA0 242 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 MED4Q9NPJ6 270 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 HINT3Q9NQE9 182 aaKnown RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 ZNF275Q9NSD4 429 aaPredicted RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 ADA2Q9NZK5 511 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 EIF3KQ9UBQ5 218 aaKnown RBP8.2□□□□□ -1.1
MSH5-218ENST00000494646 GRHPRQ9UBQ7 328 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 GPR160Q9UJ42 338 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 ADAM18Q9Y3Q7 739 aa8.2□□□□□ -1.1
MSH5-218ENST00000494646 IGLV3-9A0A075B6K5 115 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 HTR3EA5X5Y0 456 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 NPIPB13A6NJU9 1138 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 FAM157AC9JC47 383 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 NPIPB4C9JG80 1138 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 IMPA2O14732 288 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 SPRY3O43610 288 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 PRSS23O95084 383 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 SNAP29O95721 258 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 NGFP01138 241 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 IGHMP01871 453 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 CST2P09228 141 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 HNF1AP20823 631 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 ACHEP22303 614 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 GCH1P30793 250 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 MSX2P35548 267 aaPredicted RBP8.19□□□□□ -1.1
MSH5-218ENST00000494646 SRP14P37108 136 aaKnown RBP8.19□□□□□ -1.1
MSH5-218ENST00000494646 MPV17P39210 176 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 SLC9A3P48764 834 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms