RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TMEFF1Q8IYR6 380 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 CEP76Q8TAP6 659 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 RBPMSQ93062 196 aaKnown RBP10.38□□□□□ -0.75
RFC4-214ENST00000494047 FAM3DQ96BQ1 224 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 RBP7Q96R05 134 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 LRRC61Q9BV99 259 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 SLC25A32Q9H2D1 315 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 C1orf198Q9H425 327 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 APMAPQ9HDC9 416 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 FAM60AQ9NP50 221 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 SLC2A8Q9NY64 477 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 KCNG2Q9UJ96 466 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 DTX4Q9Y2E6 619 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 CLDN16Q9Y5I7 305 aa10.38□□□□□ -0.75
RFC4-214ENST00000494047 WDR87Q6ZQQ6 2873 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 IGKV3D-11A0A0A0MRZ8 115 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 IGHV1OR15-9A0A0B4J2B8 117 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 A0A1B0GVC2 190 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 A6NIN4 97 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 ZSCAN5BA6NJL1 495 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 B4DGG1 531 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 MCRIP1C9JLW8 97 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 DXOO77932 396 aaKnown RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 RPP14O95059 124 aaKnown RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 CYB5AP00167 134 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 HPXP02790 462 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 CLPSP04118 112 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 GTF2F2P13984 249 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 HTR2CP28335 458 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 POU3F4P49335 361 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 DHPSP49366 369 aaPredicted RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 ARL4DP49703 201 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 UBE2MP61081 183 aaKnown RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 HNRNPKP61978 463 aaKnown RBP eCLIP10.37□□□□□ -0.75
RFC4-214ENST00000494047 EGR4Q05215 589 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 PLCXD2Q0VAA5 305 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 RNASE12Q5GAN4 147 aaKnown RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 LYSMD4Q5XG99 296 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 FAM166AQ6J272 317 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 STEAP1BQ6NZ63 245 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 TMEM65Q6PI78 240 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 C11orf88Q6PI97 169 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 ESPNLQ6ZVH7 1005 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 OVCH2Q7RTZ1 564 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 DPY19L4Q7Z388 723 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 GPAT4Q86UL3 456 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 C17orf82Q86X59 251 aaPredicted RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 SPERTQ8NA61 448 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 ZNF511Q8NB15 262 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 CADM4Q8NFZ8 388 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 OR2AK2Q8NG84 335 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 OR4C16Q8NGL9 310 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 OR6K3Q8NGY3 331 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 ZNF519Q8TB69 540 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 GPX8Q8TED1 209 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 RLN3Q8WXF3 142 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 ORAI1Q96D31 301 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 OMA1Q96E52 524 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 CDC6Q99741 560 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 UQCC2Q9BRT2 126 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 RBCK1Q9BYM8 510 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 TSPAN10Q9H1Z9 355 aaPredicted RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 PARD6AQ9NPB6 346 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 CUTCQ9NTM9 273 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 ANKRD10Q9NXR5 420 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 DLL3Q9NYJ7 618 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 RDH8Q9NYR8 311 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 WSB2Q9NYS7 404 aaPredicted RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 KLK11Q9UBX7 282 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 GPN3Q9UHW5 284 aaPredicted RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 ING1Q9UK53 422 aaPredicted RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 ZNF346Q9UL40 294 aaKnown RBP10.37□□□□□ -0.75
RFC4-214ENST00000494047 B9D1Q9UPM9 204 aa10.37□□□□□ -0.75
RFC4-214ENST00000494047 A0A0B4J203 849 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 LOC390937A0A1W2PQ73 354 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 TCRBV16S1A1N1A0A5B0 115 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 RFPL4AA6NLU0 287 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 RFPL4AL1F8VTS6 287 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 TGFBR3LH3BV60 316 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 GNB5O14775 395 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 HCRTR2O43614 444 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 OR2F2O95006 317 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 HLA-DQA2P01906 255 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 ALDOBP05062 364 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 ITGB2P05107 769 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 ZNF823P16415 610 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 NAGAP17050 411 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 CSRP1P21291 193 aaKnown RBP10.36□□□□□ -0.75
RFC4-214ENST00000494047 MAOAP21397 527 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 BCKDHBP21953 392 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 CCKBRP32239 447 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SELENOPP49908 381 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 HCCSP53701 268 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 TAS2R31P59538 309 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SNRPNP63162 240 aaKnown RBP10.36□□□□□ -0.75
RFC4-214ENST00000494047 BTG2P78543 158 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SRSF4Q08170 494 aaKnown RBP10.36□□□□□ -0.75
RFC4-214ENST00000494047 OR2F1Q13607 317 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 EBPQ15125 230 aaKnown RBP10.36□□□□□ -0.75
RFC4-214ENST00000494047 CD226Q15762 336 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms