RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 NAA10P41227 235 aaPredicted RBP12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 EIF2B2P49770 351 aaKnown RBP12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 ACTC1P68032 377 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 ACTA1P68133 377 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 GLO1Q04760 184 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 LYPD4Q6UWN0 246 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 GDPGP1Q6ZNW5 385 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 CCDC190Q86UF4 302 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 NANOGP1Q8N7R0 232 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF511Q8NB15 262 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 OR10H4Q8NGA5 316 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 OR2M2Q96R28 347 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 INPP5EQ9NRR6 644 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 ERVK13-1Q9NX77 482 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 EMC3Q9P0I2 261 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 ATRXP46100 2492 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 ZFYVE26Q68DK2 2539 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 BSNQ9UPA5 3926 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 IGSF10Q6WRI0 2623 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 IGKV3D-15A0A087WSY6 115 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 TMEM129A0AVI4 362 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 DAPL1A0PJW8 107 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 LOC110117498-PIK3R3F6TDL0 507 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 SELENOFO60613 162 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 ATP6V1G1O75348 118 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 KHDRBS3O75525 346 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 AQP8O94778 261 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF432O94892 652 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 PTTG1O95997 202 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 HLA-DQA2P01906 255 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 OR2T7P0C7T2 308 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 CSNK1A1P48729 337 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 CD300CQ08708 224 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 RNPS1Q15287 305 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 ETFDHQ16134 617 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 HIST3H3Q16695 136 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 LHFPL3Q86UP9 236 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 TMEM123Q8N131 208 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 POC5Q8NA72 575 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 OR6N1Q8NGY5 312 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 OR2T27Q8NH04 317 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF775Q96BV0 537 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 GPR137Q96N19 417 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 TBX5Q99593 518 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 CRNNQ9UBG3 495 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 COA3Q9Y2R0 106 aaPredicted RBP12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF175Q9Y473 711 aa12.49□□□□□ -0.41
PDZRN3-210ENST00000492909 TVP23AA6NH52 213 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 TFP02787 698 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 FCGR2AP12318 317 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 SELENOPP49908 381 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 SPHARQ15513 63 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 PLXDC2Q6UX71 529 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 AAED1Q7RTV5 226 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 SLC16A9Q7RTY1 509 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 MCEMP1Q8IX19 187 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 SLC35F2Q8IXU6 374 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 TIGD4Q8IY51 512 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 Q8NA96 180 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 MCHR2Q969V1 340 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 INTS12Q96CB8 462 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 INTS14Q96SY0 518 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 MARCH7Q9H992 704 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 SIAEQ9HAT2 523 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 ING1Q9UK53 422 aaPredicted RBP12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 IGKV1D-43A0A0B4J1Z2 117 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 ATXN7O15265 892 aaPredicted RBP12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 GPANK1O95872 356 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 QDPRP09417 244 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 WNT4P56705 351 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 MLLT11Q13015 90 aaPredicted RBP12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 GALEQ14376 348 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 KRTCAP3Q53RY4 240 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 KLHL36Q8N4N3 616 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 SMAP2Q8WU79 429 aaPredicted RBP12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 NSMAFQ92636 917 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 HPS1Q92902 700 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 TMEM54Q969K7 222 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 TMEM45BQ96B21 275 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 FOXN4Q96NZ1 517 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF649Q9BS31 505 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 RNF122Q9H9V4 155 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 BCO1Q9HAY6 547 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 FOXD3Q9UJU5 478 aaPredicted RBP12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 STUB1Q9UNE7 303 aa12.48□□□□□ -0.41
PDZRN3-210ENST00000492909 PHF3Q92576 2039 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 A0A1W2PQL4 384 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF724A8MTY0 619 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 SLC43A1O75387 559 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 PRB1P04280 392 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 PTGS2P35354 604 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 CRYBB2P43320 205 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 HCCSP53701 268 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 HSF2Q03933 536 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 SPANXN2Q5MJ10 180 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 OR2G6Q5TZ20 316 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF324BQ6AW86 544 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms