RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SMARCB1Q12824 385 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 ECH1Q13011 328 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 PON3Q15166 354 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 TMEM183BQ1AE95 376 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 TTLL9Q3SXZ7 439 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 EIF3MQ7L2H7 374 aaKnown RBP1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 C6orf120Q7Z4R8 191 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 LUZP2Q86TE4 346 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 TMEM183AQ8IXX5 376 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 MREGQ8N565 214 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 STARD8Q92502 1023 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 SERPINB12Q96P63 405 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 TAAR1Q96RJ0 339 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 BPIFA3Q9BQP9 254 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 AUNIPQ9H7T9 357 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 MYOZ2Q9NPC6 264 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 LYARQ9NX58 379 aaKnown RBP1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 MTCH1Q9NZJ7 389 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 UXTQ9UBK9 157 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 KLK12Q9UKR0 248 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 CAB39Q9Y376 341 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 GOLT1BQ9Y3E0 138 aa1.75□□□□□ -2.13
HMGB1P30-201ENST00000492455 AKNAQ7Z591 1439 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 INSRP06213 1382 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 PRSS37A4D1T9 235 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 H0YHG0 523 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 SCAMP2O15127 329 aaKnown RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 KMOO15229 486 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 SLC25A27O95847 323 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ERCC1P07992 297 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ACSM4P0C7M7 580 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 TLX1NBP0CAT3 122 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CALM1P0DP23 149 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CALM2P0DP24 149 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CALM3P0DP25 149 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF250P15622 560 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF32P17041 273 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 OMGP23515 440 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 STOMP27105 288 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CX3CR1P49238 355 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 MRPL19P49406 292 aaKnown RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CRISP1P54107 249 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 HMGCS1Q01581 520 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 MXD1Q05195 221 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ILKQ13418 452 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 EBI3Q14213 229 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 SF3A2Q15428 464 aaKnown RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF726P1Q15940 193 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 HSDL1Q3SXM5 330 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ANKRD22Q5VYY1 191 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 TMEM53Q6P2H8 277 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 DUX4L9Q6RFH8 374 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CLEC2AQ6UVW9 174 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZFP2Q6ZN57 461 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 STRADAQ7RTN6 431 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CMTM1Q8IZ96 169 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 GABRG1Q8N1C3 465 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 PQLC3Q8N755 202 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 C15orf56Q8N910 161 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 PRELID2Q8N945 189 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 DUSP18Q8NEJ0 188 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 BPIFCQ8NFQ6 507 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF596Q8TC21 504 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 LKAAEAR1Q8TD35 194 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CAPSLQ8WWF8 208 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 FAM3DQ96BQ1 224 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 C8orf44Q96CB5 159 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 NAP1L5Q96NT1 182 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 OR5B12Q96R08 314 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 SDHCQ99643 169 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 TPK1Q9H3S4 243 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 NCOR1P1Q9H4R4 102 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 HRASLS2Q9NWW9 162 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF629Q9UEG4 869 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 LGALS13Q9UHV8 139 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 CD84Q9UIB8 345 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF223Q9UK11 482 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 RAB26Q9ULW5 256 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 SLC17A4Q9Y2C5 497 aa1.74□□□□□ -2.13
HMGB1P30-201ENST00000492455 WDR19Q8NEZ3 1342 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 CENPJQ9HC77 1338 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 CIB4A0PJX0 185 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 LYRM9A8MSI8 78 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 H0YIV9 168 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 TMX2-CTNND1H3BSU7 103 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 K7EMT4 169 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 CASQ2O14958 399 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 EIF4E2O60573 245 aaKnown RBP1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 HUS1O60921 280 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 ICOSLGO75144 302 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 SRP72O76094 671 aaKnown RBP1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 SERPINE2P07093 398 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 GNAO1P09471 354 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 MYL2P10916 166 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 ADRB3P13945 408 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 CCNB1P14635 433 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF823P16415 610 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 EIF2S2P20042 333 aaKnown RBP1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 BCKDHBP21953 392 aa1.73□□□□□ -2.13
HMGB1P30-201ENST00000492455 GTF2E2P29084 291 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms