RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 NHLRC1Q6VVB1 395 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 GPAT4Q86UL3 456 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF227Q86WZ6 799 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF679Q8IYX0 411 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 SHDQ96IW2 340 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 CHRNA10Q9GZZ6 450 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 IRF2BPLQ9H1B7 796 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 CHRDQ9H2X0 955 aa11.16□□□□□ -0.62
HMGN1-220ENST00000492280 TRBV5-7A0A0A0MS05 114 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 PATE3B3GLJ2 98 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 NPIPA5E9PKD4 350 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 GSTZ1O43708 216 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-220ENST00000492280 RAMP1O60894 148 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 PEX14O75381 377 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 DXOO77932 396 aaKnown RBP11.15□□□□□ -0.62
HMGN1-220ENST00000492280 CD1AP06126 327 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 SLC2A1P11166 492 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 SFTPDP35247 375 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 TLE3Q04726 772 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 PHF19Q5T6S3 580 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 SLC18B1Q6NT16 456 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 RHBDD2Q6NTF9 364 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 OR56B4Q8NH76 319 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 DNASE2BQ8WZ79 361 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 CCNL2Q96S94 520 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-220ENST00000492280 WDR77Q9BQA1 342 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-220ENST00000492280 EIF3KQ9UBQ5 218 aaKnown RBP11.15□□□□□ -0.62
HMGN1-220ENST00000492280 FBXL2Q9UKC9 423 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 NPIPA1Q9UND3 350 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 LY6G6EA0A0G2JKS1 128 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 P2RY10O00398 339 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 CTAG2O75638 210 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 PSMB1P20618 241 aaKnown RBP11.15□□□□□ -0.62
HMGN1-220ENST00000492280 MAPK3P27361 379 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-220ENST00000492280 CDAP32320 146 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 ZNF81P51508 661 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 EGR3Q06889 387 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 RNF144BQ7Z419 303 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 JAGN1Q8N5M9 183 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 OR4C16Q8NGL9 310 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 CCDC74BQ96LY2 380 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 SPACA5Q96QH8 159 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 OR2M2Q96R28 347 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 SOX7Q9BT81 388 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 NOX3Q9HBY0 568 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 STMN3Q9NZ72 180 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 WNT16Q9UBV4 365 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 STEAP1Q9UHE8 339 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 DHDHQ9UQ10 334 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 U3KQA8 63 aa11.15□□□□□ -0.62
HMGN1-220ENST00000492280 LOC107986453A0A1B0GWG9 222 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 G3V3Q6 166 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 HRGP04196 525 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 CSRP1P21291 193 aaKnown RBP11.15□□□□□ -0.63
HMGN1-220ENST00000492280 BIDP55957 195 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 CAMK2DQ13557 499 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 C2orf76Q3KRA6 126 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 GLYATL3Q5SZD4 288 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 SLC22A10Q63ZE4 541 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 PRSS42Q7Z5A4 293 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 KCTD20Q7Z5Y7 419 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 PLCZ1Q86YW0 608 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 NFAM1Q8NET5 270 aaPredicted RBP11.15□□□□□ -0.63
HMGN1-220ENST00000492280 MCHR2Q969V1 340 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 FAM46BQ96A09 425 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 SLC25A44Q96H78 314 aaPredicted RBP11.15□□□□□ -0.63
HMGN1-220ENST00000492280 HYLS1Q96M11 299 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 CRB3Q9BUF7 120 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 DPCDQ9BVM2 203 aaPredicted RBP11.15□□□□□ -0.63
HMGN1-220ENST00000492280 DLL4Q9NR61 685 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 RPH3AQ9Y2J0 694 aaPredicted RBP11.15□□□□□ -0.63
HMGN1-220ENST00000492280 SIT1Q9Y3P8 196 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 TMEM14AQ9Y6G1 99 aa11.15□□□□□ -0.63
HMGN1-220ENST00000492280 IGHV5-10-1A0A0J9YXX1 117 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 ANKRD20A5PA0PJZ0 165 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 PYCARD-AS1I3L0S3 204 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 GLSO94925 669 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 MT-ATP6P00846 226 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 IGF2P01344 180 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 CFIP05156 583 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 CSN2P05814 226 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 LIPCP11150 499 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 DNASE1P24855 282 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 RIDAP52758 137 aaKnown RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 GLO1Q04760 184 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 MFAP5Q13361 173 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 RSPO4Q2I0M5 234 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-220ENST00000492280 C2orf68Q2NKX9 166 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 MOGAT2Q3SYC2 334 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF627Q7L945 461 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 NLRC3Q7RTR2 1065 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 EID2Q8N6I1 236 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 OR1J4Q8NGS1 313 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 OR52N5Q8NH56 324 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 RNF128Q8TEB7 428 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 ASB5Q8WWX0 329 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 FAM3DQ96BQ1 224 aa11.14□□□□□ -0.63
HMGN1-220ENST00000492280 GON7Q9BXV9 100 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms