RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 NDEL1Q9GZM8 345 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 C1orf198Q9H425 327 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 IER3IP1Q9Y5U9 82 aa21.23■□□□□ 0.99
UPF3A-209ENST00000492270 NAV3Q8IVL0 2385 aa21.22■□□□□ 0.99
UPF3A-209ENST00000492270 ADRA2AP08913 450 aa21.22■□□□□ 0.99
UPF3A-209ENST00000492270 PCSK6P29122 969 aa21.22■□□□□ 0.99
UPF3A-209ENST00000492270 SDHAP31040 664 aa21.22■□□□□ 0.99
UPF3A-209ENST00000492270 RPS23P62266 143 aaKnown RBP21.22■□□□□ 0.99
UPF3A-209ENST00000492270 MS4A2Q01362 244 aa21.22■□□□□ 0.99
UPF3A-209ENST00000492270 TBC1D28Q2M2D7 210 aa21.22■□□□□ 0.99
UPF3A-209ENST00000492270 TPK1Q9H3S4 243 aa21.22■□□□□ 0.99
UPF3A-209ENST00000492270 PRSS37A4D1T9 235 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 INAFM1C9JVW0 142 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 SOCS2O14508 198 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 OR10H3O60404 316 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 SNAP29O95721 258 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 CST2P09228 141 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 CSF3P09919 207 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 SLC25A16P16260 332 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 CTLA4P16410 223 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 PDLIM4P50479 330 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 PSG4Q00888 419 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 ENDOGQ14249 297 aaKnown RBP21.21■□□□□ 0.99
UPF3A-209ENST00000492270 MAD2L1BPQ15013 274 aaPredicted RBP21.21■□□□□ 0.99
UPF3A-209ENST00000492270 CARTPTQ16568 116 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 SMARCD3Q6STE5 483 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 UGT2A3Q6UWM9 527 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 PTCHD4Q6ZW05 846 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 ARHGAP24Q8N264 748 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 FANK1Q8TC84 345 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 CLPTM1LQ96KA5 538 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 ZNF416Q9BWM5 594 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 RAB1BQ9H0U4 201 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 WNT5BQ9H1J7 359 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 SYT4Q9H2B2 425 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 EMC7Q9NPA0 242 aa21.21■□□□□ 0.99
UPF3A-209ENST00000492270 PPP1R3DO95685 299 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 PTHP01270 115 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 MSR1P21757 451 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 CCNOP22674 350 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 APLNRP35414 380 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 ALDH3B1P43353 468 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 OTPQ5XKR4 325 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 GPR139Q6DWJ6 353 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 LCN8Q6JVE9 175 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 RGS7BPQ6MZT1 257 aaPredicted RBP21.2■□□□□ 0.98
UPF3A-209ENST00000492270 DPY19L2P2Q6ZN68 376 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 OR1J2Q8NGS2 313 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 OR2H1Q9GZK4 316 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 OR52D1Q9H346 318 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 POLE4Q9NR33 117 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 TAS2R1Q9NYW7 299 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 DUSP13Q9UII6 198 aa21.2■□□□□ 0.98
UPF3A-209ENST00000492270 LOC100509620A0A075B734 347 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 VWC2LB2RUY7 222 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 SYNGR3O43761 229 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 CLPTM1O96005 669 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 FPR3P25089 353 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 STOMP27105 288 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 MAGEA2P43356 314 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 EVX1P49640 407 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 TRIM25Q14258 630 aaKnown RBP21.19■□□□□ 0.98
UPF3A-209ENST00000492270 MTX3Q5HYI7 312 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 DHFR2Q86XF0 187 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 ICA1LQ8NDH6 482 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 POM121L2Q96KW2 1035 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 MUC13Q9H3R2 512 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 RERGLQ9H628 205 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 FBXO9Q9UK97 447 aaPredicted RBP21.19■□□□□ 0.98
UPF3A-209ENST00000492270 TMCC3Q9ULS5 477 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 LYVE1Q9Y5Y7 322 aa21.19■□□□□ 0.98
UPF3A-209ENST00000492270 SONP18583 2426 aaKnown RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 M0R233 179 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 AHCYL1O43865 530 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 LCKP06239 509 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 CDKN2AP42771 156 aaKnown RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 GUCA1AP43080 201 aaPredicted RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 LOXL1Q08397 574 aaPredicted RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 DBPQ10586 325 aaPredicted RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 PPP1R8Q12972 351 aaKnown RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 ZNF774Q6NX45 483 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 PGBD2Q6P3X8 592 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 ZNF101Q8IZC7 436 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 BCAS4Q8TDM0 211 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 CCDC124Q96CT7 223 aaKnown RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 LRMDAQ9H2I8 198 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 VSX1Q9NZR4 365 aaPredicted RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 REV1Q9UBZ9 1251 aa21.18■□□□□ 0.98
UPF3A-209ENST00000492270 PRPF19Q9UMS4 504 aaKnown RBP21.18■□□□□ 0.98
UPF3A-209ENST00000492270 C5orf49A4QMS7 147 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 SLC16A7O60669 478 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 TXNDC12O95881 172 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 DAOP14920 347 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 WNT5AP41221 380 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 GSSP48637 474 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 RPS6KA3P51812 740 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 UCP2P55851 309 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 RFX4Q33E94 735 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 ALKBH6Q3KRA9 238 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 C1orf94Q6P1W5 598 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms