RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 NME2P1O60361 137 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CTNSO60931 367 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 WISP3O95389 354 aaPredicted RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 GUCA1CO95843 209 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 SERPIND1P05546 499 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 UQCRHP07919 91 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 SLC35G6P0C7Q6 338 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 C1GALT1C1LP0DN25 315 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 RNH1P13489 461 aaKnown RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 COX6B1P14854 86 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 EEF1DP29692 281 aaKnown RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 PPP2R1BP30154 601 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 KRT20P35900 424 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 OR3A3P47888 321 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CYB561P49447 251 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 HNMTP50135 292 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 HSD17B7P56937 341 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TAS2R39P59534 338 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 SKP1P63208 163 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 BTN3A2P78410 334 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CDKL1Q00532 357 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 OC90Q02509 493 aaPredicted RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 PAX2Q02962 417 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TLE4Q04727 773 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 MORF4L2Q15014 288 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 PPP1R7Q15435 360 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TSNQ15631 228 aaKnown RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 C18orf21Q32NC0 220 aaPredicted RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 ADPRMQ3LIE5 342 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CMPK2Q5EBM0 449 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CDKL4Q5MAI5 379 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 FAM45BPQ6NSW5 357 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 NIPAL1Q6NVV3 410 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 SLC30A6Q6NXT4 461 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TMIGD1Q6UXZ0 262 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 NCCRP1Q6ZVX7 275 aaPredicted RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 RFPL4BQ6ZWI9 263 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CYS1Q717R9 158 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 ABHD13Q7L211 337 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 GALNTL5Q7Z4T8 443 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 KLHL7Q8IXQ5 586 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 KLHDC8AQ8IYD2 350 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CA13Q8N1Q1 262 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TBC1D19Q8N5T2 526 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 ZFP62Q8NB50 900 aaPredicted RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 APCDD1LQ8NCL9 501 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 B3GNT7Q8NFL0 401 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TTLQ8NG68 377 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 FAM45AQ8TCE6 357 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 PHF10Q8WUB8 498 aaKnown RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 ANKRD49Q8WVL7 239 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 LRRC39Q96DD0 335 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 MS4A6EQ96DS6 147 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CERS2Q96G23 380 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CFAP36Q96G28 342 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TSNARE1Q96NA8 513 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 AIF1LQ9BQI0 150 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 CAPS2Q9BXY5 557 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 DDX47Q9H0S4 455 aaKnown RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 RHBGQ9H310 441 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 NT5DC2Q9H857 520 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 SH3BGRL2Q9UJC5 107 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 ZNF223Q9UK11 482 aaPredicted RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 ZNF490Q9ULM2 529 aaPredicted RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 CHMP2BQ9UQN3 213 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 SLC22A14Q9Y267 594 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 SH3GLB1Q9Y371 365 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 MMACHCQ9Y4U1 282 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TEX264Q9Y6I9 313 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 OBSL1O75147 1896 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 EML5Q05BV3 1969 aa2.34□□□□□ -2.04
PHC3-213ENST00000491258 NBEAL1Q6ZS30 2694 aa2.34□□□□□ -2.04
PHC3-213ENST00000491258 NBASA2RRP1 2371 aa2.34□□□□□ -2.04
PHC3-213ENST00000491258 MYO18AQ92614 2054 aaKnown RBP2.33□□□□□ -2.04
PHC3-213ENST00000491258 COL6A6A6NMZ7 2263 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 A0A0G2JMM0 328 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 A0A0G2JN53 185 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 TRBV11-1A0A0K0K1C0 115 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 A0A1W2PPB8 328 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 A0A1W2PRS3 328 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 NCF1BA6NI72 391 aaPredicted RBP2.33□□□□□ -2.04
PHC3-213ENST00000491258 FAM159BA6NKW6 160 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 ANXA2P2A6NMY6 339 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 USP27XA6NNY8 438 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 NCF1CA8MVU1 366 aaPredicted RBP2.33□□□□□ -2.04
PHC3-213ENST00000491258 KIR3DP1A8MWS1 328 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 E7ESA3 106 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 KLRC4-KLRK1H3BQV0 150 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 ZSCAN12O43309 604 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 ERI3O43414 337 aaKnown RBP2.33□□□□□ -2.04
PHC3-213ENST00000491258 FCGR3BO75015 233 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 STK16O75716 305 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 PIAS1O75925 651 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 OR2J2O76002 312 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 MYO1DO94832 1006 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 TOXO94900 526 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 GLSO94925 669 aaPredicted RBP2.33□□□□□ -2.04
PHC3-213ENST00000491258 SCELO95171 688 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 ETHE1O95571 254 aa2.33□□□□□ -2.04
PHC3-213ENST00000491258 C1QAP02745 245 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms