RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 ROPN1Q9HAT0 212 aaPredicted RBP11.44□□□□□ -0.58
CTDSP1-210ENST00000491064 LRCH1Q9Y2L9 728 aa11.44□□□□□ -0.58
CTDSP1-210ENST00000491064 CEACAM18A8MTB9 384 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 H3BSA7 217 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 ICMTO60725 284 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 TGDSO95455 350 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 CH25HO95992 272 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 PPP1CBP62140 327 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 VSNL1P62760 191 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 STX3Q13277 289 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 CDK5R2Q13319 367 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 C10orf128Q5T292 105 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 HHATQ5VTY9 493 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 REEP3Q6NUK4 255 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 ZNF774Q6NX45 483 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 BTNL3Q6UXE8 466 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 LRRN1Q6UXK5 716 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 RANBP3LQ86VV4 465 aaPredicted RBP11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 KRT73Q86Y46 540 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 C1orf174Q8IYL3 243 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 C10orf111Q8N326 155 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 POU5F2Q8N7G0 328 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 OR9I1Q8NGQ6 314 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 AKR7LQ8NHP1 331 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 ABHD4Q8TB40 342 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.43□□□□□ -0.582e-8■■■■■ 393.2
CTDSP1-210ENST00000491064 ZDHHC16Q969W1 377 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 DACT3Q96B18 629 aaPredicted RBP11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 SAMD8Q96LT4 415 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 SEPHS2Q99611 448 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 MRPL13Q9BYD1 178 aaKnown RBP11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 CHIAQ9BZP6 476 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 KCNN2Q9H2S1 579 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 MARCH7Q9H992 704 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 SIAEQ9HAT2 523 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 CCNB1IP1Q9NPC3 277 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 NANSQ9NR45 359 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 TNFRSF19Q9NS68 423 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 ZIM2Q9NZV7 527 aa11.43□□□□□ -0.58
CTDSP1-210ENST00000491064 IGHV2-70DA0A0C4DH43 119 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 CHP2O43745 196 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 TIMM8AO60220 97 aaPredicted RBP11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 ALX3O95076 343 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 WNT2P09544 360 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 SELEP16581 610 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 TNFRSF1AP19438 455 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 CDAP32320 146 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 MDH2P40926 338 aaKnown RBP11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 GDI2P50395 445 aaKnown RBP11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 POLR2JP52435 117 aaKnown RBP11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 ZNF133P52736 654 aaPredicted RBP11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 MRPS34P82930 218 aaKnown RBP11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 CDK6Q00534 326 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 BST1Q10588 318 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 GCNT6Q5T4J0 391 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 FAM205BPQ63HN1 556 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 ZNF613Q6PF04 617 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 BRD3OSQ6XYD6 125 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 OR10S1Q8NGN2 331 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 NABP1Q96AH0 204 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 SSBP3Q9BWW4 388 aaPredicted RBP11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 NANOGQ9H9S0 305 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 SLCO1B3Q9NPD5 702 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 SDR39U1Q9NRG7 319 aaPredicted RBP11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 ZNF229Q9UJW7 825 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 SLC13A4Q9UKG4 626 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 RYR3Q15413 4870 aa11.42□□□□□ -0.58
CTDSP1-210ENST00000491064 PRORSD1PA6NEY8 169 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 SLC22A31A6NKX4 558 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 CENPBD1B2RD01 187 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 HDAC3O15379 428 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 SLC2A10O95528 541 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 TSPAN15O95858 294 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 ASAH2BP0C7U1 165 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 TNFSF4P23510 183 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 PSG4Q00888 419 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 PSG7Q13046 419 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 HLXQ14774 488 aaPredicted RBP11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 TAF9Q16594 264 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 NXNQ6DKJ4 435 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 SLC2A7Q6PXP3 512 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 Q6YL49 198 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 MSRB3Q8IXL7 192 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 MUC20Q8N307 709 aaPredicted RBP11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 ITLN1Q8WWA0 313 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 RAB40AQ8WXH6 277 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 ASB10Q8WXI3 467 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 THOC1Q96FV9 657 aaKnown RBP11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 MCHR1Q99705 422 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 EVA1AQ9H8M9 152 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 NOX4Q9NPH5 578 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 SLC25A37Q9NYZ2 338 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 PPP1R3CQ9UQK1 317 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 UGT2A1Q9Y4X1 527 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
CTDSP1-210ENST00000491064 TRPC5OSA6NMA1 111 aa11.4□□□□□ -0.58
CTDSP1-210ENST00000491064 MCIDASD6RGH6 385 aa11.4□□□□□ -0.58
CTDSP1-210ENST00000491064 TMEM178BH3BS89 294 aa11.4□□□□□ -0.58
CTDSP1-210ENST00000491064 M0R3H8 397 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms