RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 IL19Q9UHD0 177 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 LRRN3E7EW58 273 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 RNASEK-C17orf49H0YIS7 233 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 PHYHO14832 338 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 ZSCAN12O43309 604 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 BGLAPP02818 100 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 CHRNGP07510 517 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 VSIG10L2P0DP72 767 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 CD33P20138 364 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 CLDN8P56748 225 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 RNF220Q5VTB9 566 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 PXKQ7Z7A4 578 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 OR8J2Q8NGG1 315 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 AGR3Q8TD06 166 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 MOGAT1Q96PD6 335 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 ASPNQ9BXN1 380 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 ZNRD1Q9P1U0 126 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 FAM96BQ9Y3D0 163 aa11.28□□□□□ -0.6
EXOSC3-207ENST00000490516 A0A087WUV0 522 aaPredicted RBP11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 LCE6AA0A183 80 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 PRSS51A0A1B0GVH4 220 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 C11orf98E9PRG8 122 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 PLPP3O14495 311 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 PLIN3O60664 434 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 GLRA3O75311 464 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 FGF4P08620 206 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 QDPRP09417 244 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 CPA3P15088 417 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 EPHA3P29320 983 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 EMX1Q04741 257 aaPredicted RBP11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 METTL11BQ5VVY1 283 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 C5orf46Q6UWT4 87 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 UNQ6126/PRO20091Q6UXV3 157 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 PTOV1Q86YD1 416 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 SCAIQ8N9R8 606 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 OR4F17Q8NGA8 305 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 AKR7LQ8NHP1 331 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 VANGL1Q8TAA9 524 aaPredicted RBP11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 ACMSDQ8TDX5 336 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 OR4F4Q96R69 305 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 POFUT1Q9H488 388 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 NOP53Q9NZM5 478 aaKnown RBP11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 RPS6KB2Q9UBS0 482 aa11.27□□□□□ -0.61
EXOSC3-207ENST00000490516 STAB2Q8WWQ8 2551 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 LYSTQ99698 3801 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 IGHV3-64DA0A0J9YX35 117 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 ADARB2-AS1A8MUL3 147 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 H3BSA7 217 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 CD28P10747 220 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 ZNF32P17041 273 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 ETV4P43268 484 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 GDI2P50395 445 aaKnown RBP11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 MELKQ14680 651 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 KLHL22Q53GT1 634 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 RPS26P11Q5JNZ5 115 aaPredicted RBP11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 SLC35D2Q76EJ3 337 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 ZER1Q7Z7L7 766 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 C10orf107Q8IVU9 208 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 CCDC63Q8NA47 563 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 OR6X1Q8NH79 312 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 ZNF566Q969W8 418 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 TECTBQ96PL2 329 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 SPATA9Q9BWV2 254 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 CNTD2Q9H8S5 307 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 MRPL39Q9NYK5 338 aaKnown RBP11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 HYDINQ4G0P3 5121 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 DNAH1Q9P2D7 4330 aa11.26□□□□□ -0.61
EXOSC3-207ENST00000490516 A0A1B0GWA3 101 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 A0A1W2PPM1 405 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 SURF4O15260 269 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 FBXO24O75426 580 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 PGA4P0DJD7 388 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 PGA3P0DJD8 388 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 KIR2DS4P43632 304 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 ANXA11P50995 505 aaKnown RBP11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 CASP8Q14790 479 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 DMRTC1Q5HYR2 192 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 C11orf88Q6PI97 169 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 C19orf18Q8NEA5 215 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 WFDC9Q8NEX5 89 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 TEX37Q96LM6 180 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 C12orf10Q9HB07 376 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 CCNB1IP1Q9NPC3 277 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 MAN2C1Q9NTJ4 1040 aa11.25□□□□□ -0.61
EXOSC3-207ENST00000490516 IFNL4K9M1U5 179 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 OPN1SWP03999 348 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 LIPFP07098 398 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 FBP1P09467 338 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 ADORA3P0DMS8 318 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 HTR2AP28223 471 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 RPL4P36578 427 aaKnown RBP11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 CRATP43155 626 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 ERFP50548 548 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 ARF6P62330 175 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 TAF11Q15544 211 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 CCDC153Q494R4 210 aa11.24□□□□□ -0.61
EXOSC3-207ENST00000490516 ANXA8L1Q5VT79 327 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms