RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 STK38LQ9Y2H1 464 aa5.81□□□□□ -1.48
PDLIM1-203ENST00000490391 JRKLQ9Y4A0 524 aa5.81□□□□□ -1.48
PDLIM1-203ENST00000490391 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
PDLIM1-203ENST00000490391 A0A096LPI6 279 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 BTBD17A6NE02 478 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 ICMTO60725 284 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 AHSA1O95433 338 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 DUS4LO95620 317 aaKnown RBP5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 LHBP01229 141 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 MMP7P09237 267 aaPredicted RBP5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 RPS4Y1P22090 263 aaKnown RBP5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 GRPRP30550 384 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 PSMB10P40306 273 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 HBA1P69905 142 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 C1DQ13901 141 aaKnown RBP5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 SMU1Q2TAY7 513 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 SPATS1Q496A3 300 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 RFTN2Q52LD8 501 aaPredicted RBP5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 XKR7Q5GH72 579 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 MTX3Q5HYI7 312 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 MRPL2Q5T653 305 aaKnown RBP5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 LIPMQ5VYY2 423 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 ZFAND6Q6FIF0 208 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 WDR88Q6ZMY6 472 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 NLRC3Q7RTR2 1065 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 KLHL7Q8IXQ5 586 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 PDZD9Q8IXQ8 264 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 CLEC4FQ8N1N0 589 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 SCCPDHQ8NBX0 429 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 ADPRHL1Q8NDY3 354 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 OR1J2Q8NGS2 313 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 VANGL1Q8TAA9 524 aaPredicted RBP5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 MIPOL1Q8TD10 442 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 L3HYPDHQ96EM0 354 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 ASCL2Q99929 193 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 SLC19A3Q9BZV2 496 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 OR51I1Q9H343 314 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 PALMDQ9NP74 551 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 MID1IP1Q9NPA3 183 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 B3GAT2Q9NPZ5 323 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 INPP5EQ9NRR6 644 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 TMEM38BQ9NVV0 291 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 IL19Q9UHD0 177 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 FAM96BQ9Y3D0 163 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 DNAH17Q9UFH2 4485 aa5.8□□□□□ -1.48
PDLIM1-203ENST00000490391 LOC100509620A0A075B734 347 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 MS4A18H0YCH9 400 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 H3BSA7 217 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 AIM2O14862 343 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 RAD51CO43502 376 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 NPHS1O60500 1241 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 CYB5R3P00387 301 aaPredicted RBP5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 LIPFP07098 398 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 INHBAP08476 426 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 GKN3PP0CG01 181 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 UQCRBP14927 111 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 ARRB2P32121 409 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 RPS5P46782 204 aaKnown RBP5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 PRKAA2P54646 552 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 RPL38P63173 70 aaKnown RBP5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 PSG7Q13046 419 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 MS4A18Q3C1V0 323 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 TCTEX1D4Q5JR98 221 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 FAM201AQ5SY85 155 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 METTL11BQ5VVY1 283 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 WBP2NLQ6ICG8 309 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 TMEM53Q6P2H8 277 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 KRT77Q7Z794 578 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 SNX32Q86XE0 403 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 PTOV1Q86YD1 416 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 UEVLDQ8IX04 471 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 CADM2Q8N3J6 435 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 SDR9C7Q8NEX9 313 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 ZNF420Q8TAQ5 688 aaPredicted RBP5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 COQ8BQ96D53 544 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 SLC41A3Q96GZ6 507 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 SLC35G5Q96KT7 338 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 POM121L2Q96KW2 1035 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 RCHY1Q96PM5 261 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 OR2V2Q96R30 315 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 WNT10AQ9GZT5 417 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 SLC38A1Q9H2H9 487 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 LRMDAQ9H2I8 198 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 RLIMQ9NVW2 624 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 CTSZQ9UBR2 303 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 DNAH2Q9P225 4427 aa5.79□□□□□ -1.48
PDLIM1-203ENST00000490391 RNF103-CHMP3A0A140T963 221 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 CDHR4A6H8M9 788 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 LSM1O15116 133 aaKnown RBP5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 CHST1O43916 411 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 FCN3O75636 299 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 AGR2O95994 175 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 PTHP01270 115 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 PRG2P13727 222 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 TNFSF4P23510 183 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 ATP5F1P24539 256 aaPredicted RBP5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 SOAT1P35610 550 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 HPCAL1P37235 193 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 MAGEA4P43358 317 aa5.78□□□□□ -1.48
PDLIM1-203ENST00000490391 CSNK1A1P48729 337 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms