RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SIX2Q9NPC8 291 aa2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 THUMPD1Q9NXG2 353 aaKnown RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 WRAP73Q9P2S5 460 aaPredicted RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 MRPS18CQ9Y3D5 142 aaKnown RBP2.59□□□□□ -1.99
DEPDC1-204ENST00000489862 MYO5AQ9Y4I1 1855 aaKnown RBP2.59□□□□□ -2
DEPDC1-204ENST00000489862 BRCA2P51587 3418 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 COL2A1P02458 1487 aaPredicted RBP2.58□□□□□ -2
DEPDC1-204ENST00000489862 MROH7Q68CQ1 1323 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 ADGRA3Q8IWK6 1321 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 TVP23AA6NH52 213 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 NKX6-3A6NJ46 265 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 SLC22A20A6NK97 555 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 TMCO5BA8MYB1 307 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 FBP2O00757 339 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 GPR171O14626 319 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 AIM2O14862 343 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 RBBP9O75884 186 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 RCBTB2O95199 551 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 FARS2O95363 451 aaKnown RBP2.58□□□□□ -2
DEPDC1-204ENST00000489862 ALDOBP05062 364 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 OR9G9P0C7N8 305 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 SLC35E2BP0CK96 405 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 BCKDHAP12694 445 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 HLA-GP17693 338 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 PSMC3P17980 439 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 FGF9P31371 208 aaPredicted RBP2.58□□□□□ -2
DEPDC1-204ENST00000489862 UGT2B10P36537 528 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 DDOSTP39656 456 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 CX3CR1P49238 355 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 VEGFCP49767 419 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 SERPINB8P50452 374 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 PAX2Q02962 417 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 SCRN3Q0VDG4 424 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 EMC2Q15006 297 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 DGUOKQ16854 277 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 EXOC3L4Q17RC7 722 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 TRMT5Q32P41 509 aaKnown RBP2.58□□□□□ -2
DEPDC1-204ENST00000489862 MFSD14CQ5VZR4 134 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 FAM219BQ5XKK7 198 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 STUMQ69YW2 141 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 SLC26A11Q86WA9 606 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 TMEM25Q86YD3 366 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 IQCKQ8N0W5 287 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 C17orf78Q8N4C9 275 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 HSD17B11Q8NBQ5 300 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 OR51F2Q8NH61 342 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 ZNF461Q8TAF7 563 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 ADAMTS16Q8TE57 1224 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 DYRK2Q92630 601 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 RASL10AQ92737 203 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 DYNLL2Q96FJ2 89 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 RNF170Q96K19 258 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 RCHY1Q96PM5 261 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 ULBP2Q9BZM5 246 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 SHCBP1LQ9BZQ2 653 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 NAT10Q9H0A0 1025 aaKnown RBP2.58□□□□□ -2
DEPDC1-204ENST00000489862 KIR3DX1Q9H7L2 352 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 NIPAL2Q9H841 368 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 ZBTB20Q9HC78 741 aaPredicted RBP2.58□□□□□ -2
DEPDC1-204ENST00000489862 IL20Q9NYY1 176 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 ABCD2Q9UBJ2 740 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 B4GALT7Q9UBV7 327 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 KLK11Q9UBX7 282 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 KIF25Q9UIL4 384 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 GMPPBQ9Y5P6 360 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 FER1L5A0AVI2 2057 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 SSC5DA1L4H1 1573 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 SCN4AP35499 1836 aa2.58□□□□□ -2
DEPDC1-204ENST00000489862 MKI67P46013 3256 aaKnown RBP2.58□□□□□ -2
DEPDC1-204ENST00000489862 IGHV3-20A0A0C4DH32 117 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PP2D1A8MPX8 630 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 TRDCB7Z8K6 153 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 TNFSF11O14788 317 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 SURF4O15260 269 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 OR5F1O95221 314 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 CLIC3O95833 236 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 IGHV3-9P01782 118 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PRSS1P07477 247 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 H2AFXP16104 143 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 HOXB8P17481 243 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 RPS12P25398 132 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 OR1E1P30953 314 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 DCTP40126 519 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 PTGDSP41222 190 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 DAP3P51398 398 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 DVL1P1P54792 670 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 ABCE1P61221 599 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 FKBP1AP62942 108 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 MRPS22P82650 360 aaKnown RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 ZNF33AQ06730 810 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 TPBGQ13641 420 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 NDUFA9Q16795 377 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 C5orf47Q569G3 176 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 DDI2Q5TDH0 399 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 TIGD3Q6B0B8 471 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 C1orf94Q6P1W5 598 aa2.57□□□□□ -2
DEPDC1-204ENST00000489862 USP50Q70EL3 339 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 SETD3Q86TU7 594 aaPredicted RBP2.57□□□□□ -2
DEPDC1-204ENST00000489862 KRTAP7-1Q8IUC3 87 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms