RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 TTC41PQ6P2S7 1318 aa1.4□□□□□ -2.18
CPSF3-205ENST00000489629 WDR19Q8NEZ3 1342 aa1.4□□□□□ -2.18
CPSF3-205ENST00000489629 BRWD3Q6RI45 1802 aa1.4□□□□□ -2.18
CPSF3-205ENST00000489629 CAMTA1Q9Y6Y1 1673 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 INSRP06213 1382 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 NINLQ9Y2I6 1382 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 IGLV2-18A0A075B6J9 118 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 A0A075B6Q4 140 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 A0A0B4J2A0 478 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 KIR2DS1A0A191URI9 304 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 PRSS37A4D1T9 235 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 COLCA2A8K830 154 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 SPECC1L-ADORA2AF8WAN1 911 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 RAB29O14966 203 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 PPP1R2P9O14990 202 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 MRPS12O15235 138 aaKnown RBP1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CHST1O43916 411 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 OR2J3O76001 311 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ERLIN2O94905 339 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 C6orf47O95873 294 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 FGGP02679 453 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 FTH1P02794 183 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 BGLAPP02818 100 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 GZMAP12544 262 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ANXA8P13928 327 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CNR1P21554 472 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 DCKP27707 260 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 SERPINB5P36952 375 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CDKN1BP46527 198 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 RPS5P46782 204 aaKnown RBP1.4□□□□□ -2.19
CPSF3-205ENST00000489629 IRF8Q02556 426 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 SELENBP1Q13228 472 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 KIR2DS1Q14954 304 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 TGFBIQ15582 683 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 TTLL9Q3SXZ7 439 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CHRFAM7AQ494W8 412 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ZBED5Q49AG3 693 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ABCA11PQ4W5N1 156 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ANXA8L1Q5VT79 327 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CARD17Q5XLA6 110 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 SPECC1LQ69YQ0 1117 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 SLC25A34Q6PIV7 304 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 PEX26Q7Z412 305 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 HMGN2P46Q86SG4 172 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 MMAAQ8IVH4 418 aaKnown RBP1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ZNF547Q8IVP9 402 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 C12orf56Q8IXR9 622 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 STPG2Q8N412 459 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CEP112Q8N8E3 955 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 Q8N976 141 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 FBXL13Q8NEE6 735 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 OR5B3Q8NH48 314 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 UBALD1Q8TB05 177 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 GPR151Q8TDV0 419 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ACMSDQ8TDX5 336 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 GEMIN6Q8WXD5 167 aaKnown RBP1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ZNF707Q96C28 371 aaPredicted RBP1.4□□□□□ -2.19
CPSF3-205ENST00000489629 TSSK3Q96PN8 268 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 TAAR1Q96RJ0 339 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 SLC29A1Q99808 456 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 BPIFA3Q9BQP9 254 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CENPKQ9BS16 269 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 ILKAPQ9H0C8 392 aaPredicted RBP1.4□□□□□ -2.19
CPSF3-205ENST00000489629 TMEM185BQ9H7F4 350 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 GEMIN7Q9H840 131 aaKnown RBP1.4□□□□□ -2.19
CPSF3-205ENST00000489629 NEK6Q9HC98 313 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 GCNT4Q9P109 453 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 SHPKQ9UHJ6 478 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 PITPNC1Q9UKF7 332 aa1.4□□□□□ -2.19
CPSF3-205ENST00000489629 CARMIL3Q8ND23 1372 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 TUBGCP6Q96RT7 1819 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 IGLV11-55A0A075B6I3 123 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 TRAV39A0A0B4J263 110 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 F6UB75 175 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 DYNC1I1O14576 645 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 CLOCKO15516 846 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 CDH16O75309 829 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 SPAG7O75391 227 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 EEDO75530 441 aaKnown RBP1.39□□□□□ -2.19
CPSF3-205ENST00000489629 RBBP9O75884 186 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 UTS2O95399 124 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 H6PDO95479 791 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 PLEKP08567 350 aaPredicted RBP1.39□□□□□ -2.19
CPSF3-205ENST00000489629 TNNI1P19237 187 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 AK4P27144 223 aaPredicted RBP1.39□□□□□ -2.19
CPSF3-205ENST00000489629 HRH1P35367 487 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 AQP2P41181 271 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 CSNK1EP49674 416 aaKnown RBP1.39□□□□□ -2.19
CPSF3-205ENST00000489629 TMED10P49755 219 aaKnown RBP1.39□□□□□ -2.19
CPSF3-205ENST00000489629 SSR4P51571 173 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 CCNHP51946 323 aaPredicted RBP1.39□□□□□ -2.19
CPSF3-205ENST00000489629 CRISP1P54107 249 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 PON3Q15166 354 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 PPP1R7Q15435 360 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 VPS26BQ4G0F5 336 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 Q6ZR03 302 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 TMEM179Q6ZVK1 233 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 BIVMQ86UB2 503 aa1.39□□□□□ -2.19
CPSF3-205ENST00000489629 PCP2Q8IVA1 136 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms