RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 GCNT2Q8N0V5 402 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 CADM3Q8N126 398 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 ZFP41Q8N8Y5 198 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 OR6S1Q8NH40 331 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 SETD6Q8TBK2 473 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 TEAD3Q99594 435 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 PRRG4Q9BZD6 226 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 BABAM2Q9NXR7 383 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 KLHL21Q9UJP4 597 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 SLC5A6Q9Y289 635 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 INTS1Q8N201 2190 aaKnown RBP17.18■□□□□ 0.34
CCM2-216ENST00000488727 A0A0G2JNJ9 132 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 GABRPO00591 440 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 RGS5O15539 181 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 FCGR2AP12318 317 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 CELP19835 753 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 GRPRP30550 384 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 P2RY4P51582 365 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 SRSF1Q07955 248 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCM2-216ENST00000488727 CRMP1Q14194 572 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 ABLIM2Q6H8Q1 611 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 TMEM211Q6ICI0 200 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 KLBQ86Z14 1044 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 C10orf53Q8N6V4 93 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 LRRC17Q8N6Y2 441 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 SYT14Q8NB59 555 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 MIXL1Q9H2W2 232 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 Q9UFV3 132 aa17.18■□□□□ 0.34
CCM2-216ENST00000488727 ING1Q9UK53 422 aaPredicted RBP17.18■□□□□ 0.34
CCM2-216ENST00000488727 DAPL1A0PJW8 107 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 EIF1BO60739 113 aaKnown RBP17.17■□□□□ 0.34
CCM2-216ENST00000488727 CYTIPO60759 359 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 SBK2P0C263 348 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 ACTC1P68032 377 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 ACTA1P68133 377 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 FOXF2Q12947 444 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 KLHL12Q53G59 568 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 RIPPLY2Q5TAB7 128 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 ZNF417Q8TAU3 575 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 INTS12Q96CB8 462 aaKnown RBP17.17■□□□□ 0.34
CCM2-216ENST00000488727 ZNF587Q96SQ5 575 aaPredicted RBP17.17■□□□□ 0.34
CCM2-216ENST00000488727 SRRQ9GZT4 340 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 TPK1Q9H3S4 243 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 ADGRL4Q9HBW9 690 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 KLHL13Q9P2N7 655 aa17.17■□□□□ 0.34
CCM2-216ENST00000488727 AQP7P3A6NL99 342 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 RNF13O43567 381 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 MT-ATP6P00846 226 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 IL2RAP01589 272 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 NOS3P29474 1203 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 TGM4P49221 684 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 ZNF79Q15937 498 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 DDI2Q5TDH0 399 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 RND1Q92730 232 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 TMED9Q9BVK6 235 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 ISG20L2Q9H9L3 353 aaKnown RBP17.16■□□□□ 0.34
CCM2-216ENST00000488727 TRIM36Q9NQ86 728 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 CLEC4AQ9UMR7 237 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 ZNF716A6NP11 495 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 RGS9O75916 674 aaPredicted RBP17.16■□□□□ 0.34
CCM2-216ENST00000488727 OR7A10O76100 309 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 ASAH2BP0C7U1 165 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 CFL1P23528 166 aaKnown RBP17.16■□□□□ 0.34
CCM2-216ENST00000488727 PER3P56645 1201 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 TAS2R43P59537 309 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 MFSD13AQ14CX5 517 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 GUSBP1Q15486 140 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 B3GLCTQ6Y288 498 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 OR51V1Q9H2C8 321 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 FKRPQ9H9S5 495 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 ABCB9Q9NP78 766 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 NANSQ9NR45 359 aa17.16■□□□□ 0.34
CCM2-216ENST00000488727 HELZ2Q9BYK8 2649 aaKnown RBP17.15■□□□□ 0.34
CCM2-216ENST00000488727 MT-ND5P03915 603 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 RPS7P62081 194 aaKnown RBP17.15■□□□□ 0.34
CCM2-216ENST00000488727 RPS4XP62701 263 aaKnown RBP17.15■□□□□ 0.34
CCM2-216ENST00000488727 PPP3R1P63098 170 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 RASGEF1BQ0VAM2 473 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 GGTLC2Q14390 218 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 TRAM1Q15629 374 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 DPY19L2P2Q6ZN68 376 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 MAMDC2Q7Z304 686 aaPredicted RBP17.15■□□□□ 0.34
CCM2-216ENST00000488727 OR10H4Q8NGA5 316 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 LIPHQ8WWY8 451 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 ERMAPQ96PL5 475 aaPredicted RBP17.15■□□□□ 0.34
CCM2-216ENST00000488727 DCLRE1CQ96SD1 692 aaKnown RBP17.15■□□□□ 0.34
CCM2-216ENST00000488727 GPX7Q96SL4 187 aaPredicted RBP17.15■□□□□ 0.34
CCM2-216ENST00000488727 NAA11Q9BSU3 229 aaPredicted RBP17.15■□□□□ 0.34
CCM2-216ENST00000488727 CHST11Q9NPF2 352 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 TENM4Q6N022 2769 aa17.15■□□□□ 0.34
CCM2-216ENST00000488727 USP9XQ93008 2570 aaPredicted RBP17.14■□□□□ 0.33
CCM2-216ENST00000488727 A0A1W2PQL4 384 aaPredicted RBP17.14■□□□□ 0.33
CCM2-216ENST00000488727 CASKO14936 926 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 ARPC3O15145 178 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 ZG16O60844 167 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 APOA1P02647 267 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 TMIGD3P0DMS9 266 aaPredicted RBP17.14■□□□□ 0.33
CCM2-216ENST00000488727 RNPS1Q15287 305 aaKnown RBP17.14■□□□□ 0.33
CCM2-216ENST00000488727 OR2A2Q6IF42 318 aa17.14■□□□□ 0.33
CCM2-216ENST00000488727 MTFR2Q6P444 385 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms