RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 OR10H5Q8NGA6 315 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 RADILQ96JH8 1075 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 CDADC1Q9BWV3 514 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 SLC25A19Q9HC21 320 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 POLE4Q9NR33 117 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 USE1Q9NZ43 259 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 NPAP1Q9NZP6 1156 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 FBXL3Q9UKT7 428 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 POLR1DQ9Y2S0 133 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 UGT2A1Q9Y4X1 527 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 DPRXA6NFQ7 191 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 C12orf71A8MTZ7 269 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 DEFB108AA8MXU0 73 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 ABCD4O14678 606 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 PTHP01270 115 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 HRGP04196 525 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 ALPLP05186 524 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 CST2P09228 141 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 PATE4P0C8F1 98 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 PRF1P14222 555 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 CD40P25942 277 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 IDH3GP51553 393 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-219ENST00000488186 HSF2Q03933 536 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 FAM27BQ5VT28 67 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 SLC22A25Q6T423 547 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 FAM169BQ8N8A8 192 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 OR9Q1Q8NGQ5 310 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 RACGAP1Q9H0H5 632 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 EMC7Q9NPA0 242 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 TMEFF2Q9UIK5 374 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-219ENST00000488186 POU2F3Q9UKI9 436 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 RNF115Q9Y4L5 304 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 TEX15Q9BXT5 2789 aa13.72□□□□□ -0.21
C9orf3-219ENST00000488186 LRBAP50851 2863 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 IQCMA0A1B0GVH7 501 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 SURF4O15260 269 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 CRYAAP02489 173 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 ZNF823P16415 610 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 PYCR1P32322 319 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 SLC25A1P53007 311 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 LRRC36Q1X8D7 754 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 C3orf36Q3SXR2 165 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 ZIK1Q3SY52 487 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-219ENST00000488186 ZNF362Q5T0B9 420 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-219ENST00000488186 FOXL2NBQ6ZUU3 175 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 ZBTB46Q86UZ6 589 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 ALDH16A1Q8IZ83 802 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 IL17RDQ8NFM7 739 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 NABP1Q96AH0 204 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 WACQ9BTA9 647 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 GRIP2Q9C0E4 1043 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 OR51V1Q9H2C8 321 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 B3GNT2Q9NY97 397 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 H2AFY2Q9P0M6 372 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-219ENST00000488186 TIMM10BQ9Y5J6 103 aa13.71□□□□□ -0.21
C9orf3-219ENST00000488186 IGLV1-36A0A0B4J1U3 117 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 IGHV1-18A0A0C4DH31 117 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 FAM183AA6NL82 134 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 ZAR1LA6NP61 321 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 DCTN6O00399 190 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 SIAH2O43255 324 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 MPZL1O95297 269 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 GYPBP06028 91 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 FMO3P31513 532 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 BLVRAP53004 296 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 CDC42P60953 191 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 RPS7P62081 194 aaKnown RBP13.7□□□□□ -0.22
C9orf3-219ENST00000488186 LSM6P62312 80 aaKnown RBP13.7□□□□□ -0.22
C9orf3-219ENST00000488186 TEKQ02763 1124 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 RAB39AQ14964 217 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 KLHL12Q53G59 568 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 PLBD1Q6P4A8 553 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF704Q6ZNC4 412 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-219ENST00000488186 CDC20BQ86Y33 519 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 OR51L1Q8NGJ5 315 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 OR6K6Q8NGW6 343 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 FGFBP3Q8TAT2 258 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 C11orf40Q8WZ69 217 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF416Q9BWM5 594 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 GABARAPL3Q9BY60 117 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 MED20Q9H944 212 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 EDARQ9UNE0 448 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 ATP23Q9Y6H3 246 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 PRR14LQ5THK1 2151 aa13.7□□□□□ -0.22
C9orf3-219ENST00000488186 ANKRD17O75179 2603 aaKnown RBP13.69□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF503-AS2A6NEH8 195 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 TLX2O43763 284 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-219ENST00000488186 TMCC2O75069 709 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 GPANK1O95872 356 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 IGKV3-15P01624 115 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 SERPINA5P05154 406 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 SCG5P05408 212 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 CECR9P0C854 216 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 ZNF32P17041 273 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 SPI1P17947 270 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 EPHA2P29317 976 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 APLNRP35414 380 aa13.69□□□□□ -0.22
C9orf3-219ENST00000488186 POLR2IP36954 125 aaKnown RBP13.69□□□□□ -0.22
C9orf3-219ENST00000488186 SCRN3Q0VDG4 424 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms