RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 OR1S2Q8NGQ3 325 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 FAM104AQ969W3 186 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 LZTS2Q9BRK4 669 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 HMG20AQ9NP66 347 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 INPP5EQ9NRR6 644 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 HRASLS2Q9NWW9 162 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 PISDQ9UG56 409 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CSDC2Q9Y534 153 aaKnown RBP2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 LTBP1Q14766 1721 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 MAPK8IP3Q9UPT6 1336 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CEMIPQ8WUJ3 1361 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF816-ZNF321PA0A0X1KG74 233 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 SMCO2A6NFE2 343 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF716A6NP11 495 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 AP3B1O00203 1094 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 SIRPB1O00241 398 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 MRPS12O15235 138 aaKnown RBP2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR2J3O76001 311 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 IGLV2-23P01705 113 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 FTH1P02794 183 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF735P0CB33 412 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 FOLR1P15328 257 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 OTX1P32242 354 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 CEACAM6P40199 344 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 NSG1P42857 185 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 CDKN1BP46527 198 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLAQ13239 276 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 MAB21L1Q13394 359 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 PON3Q15166 354 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 PPM1LQ5SGD2 360 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZYG11AQ6WRX3 759 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 LINC00173Q6ZV60 143 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 NIPA1Q7RTP0 329 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC16A14Q7RTX9 510 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 TMEM150AQ86TG1 271 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 BIVMQ86UB2 503 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 TTC5Q8N0Z6 440 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 Q8N976 141 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR2A1Q8NGT9 310 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 SYNPRQ8TBG9 265 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 RAB3IL1Q8TBN0 382 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 ABHD3Q8WU67 409 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 PDXPQ96GD0 296 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR2A5Q96R48 311 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF382Q96SR6 550 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 MICU1Q9BPX6 476 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC40A1Q9NP59 571 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 RABL2AQ9UBK7 228 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 PITPNC1Q9UKF7 332 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 F11RQ9Y624 299 aaKnown RBP2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 KCNE3Q9Y6H6 103 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 SYNRGQ9UMZ2 1314 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 CNTNAP1P78357 1384 aa2.35□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNFX1Q9P2E3 1918 aaKnown RBP2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 MYO10Q9HD67 2058 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 A0A075B6Q4 140 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR6C74A6NCV1 312 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 TCP11X1B4DZS4 312 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 ANKRD63C9JTQ0 380 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 NDUFAB1O14561 156 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 DPM1O60762 260 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF324O75467 553 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 UTS2O95399 124 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 CTDNEP1O95476 244 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 CISD3P0C7P0 127 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF43P17038 809 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 PGAM1P18669 254 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 CDKN2BP42772 138 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 CSNK1A1P48729 337 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 CX3CR1P49238 355 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 PRMT2P55345 433 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 IRF4Q15306 451 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZSCAN26Q16670 478 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 PTPN20Q4JDL3 420 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 SPANXN2Q5MJ10 180 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 VAX1Q5SQQ9 334 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF691Q5VV52 312 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 ASCL5Q7RTU5 278 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 IQCKQ8N0W5 287 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 PGAM4Q8N0Y7 254 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 BBS5Q8N3I7 341 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 FAM86B1Q8N7N1 296 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR4A4PQ8NGN8 299 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 FAM81AQ8TBF8 368 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 KIFAP3Q92845 792 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 SEH1LQ96EE3 360 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 RNF157Q96PX1 679 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR5B12Q96R08 314 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 CHP1Q99653 195 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC29A1Q99808 456 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 C20orf24Q9BUV8 137 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 RPP21Q9H633 154 aaKnown RBP2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 TMEM14AQ9Y6G1 99 aa2.34□□□□□ -2.03
HMGB1P36-201ENST00000487709 TRBV11-1A0A0K0K1C0 115 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 KLHL41O60662 606 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 ENTPD5O75356 428 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 ERLIN1O75477 346 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 SRP72O76094 671 aaKnown RBP2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 H6PDO95479 791 aa2.33□□□□□ -2.04
HMGB1P36-201ENST00000487709 ACSM4P0C7M7 580 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms