RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 MPP4Q96JB8 637 aa13.69□□□□□ -0.22
SRRT-212ENST00000487311 C1orf147Q96MC9 270 aaPredicted RBP13.69□□□□□ -0.22
SRRT-212ENST00000487311 CGREF1Q99674 301 aa13.69□□□□□ -0.22
SRRT-212ENST00000487311 SLC19A3Q9BZV2 496 aa13.69□□□□□ -0.22
SRRT-212ENST00000487311 KAT8Q9H7Z6 458 aaKnown RBP13.69□□□□□ -0.22
SRRT-212ENST00000487311 NANOGQ9H9S0 305 aa13.69□□□□□ -0.22
SRRT-212ENST00000487311 NPHS2Q9NP85 383 aa13.69□□□□□ -0.22
SRRT-212ENST00000487311 A0A1W2PRG6 482 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 ISPDA4D126 451 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 TRAPPC2LH3BP13 241 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 MT-ND1P03886 318 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 MT-ND5P03915 603 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 TSPAN19P0C672 248 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 HKR1P10072 659 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 TNFRSF1BP20333 461 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 GATA3P23771 443 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 GCH1P30793 250 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 ATP4BP51164 291 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 ERVK-25P63136 954 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 MRPS34P82930 218 aaKnown RBP13.68□□□□□ -0.22
SRRT-212ENST00000487311 SGCAQ16586 387 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 SLC25A47Q6Q0C1 308 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 CLDN22Q8N7P3 220 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 DEFB108BQ8NET1 73 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 TMEM255BQ8WV15 326 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 DCLRE1CQ96SD1 692 aaKnown RBP13.68□□□□□ -0.22
SRRT-212ENST00000487311 MSL2Q9HCI7 577 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 CCNB1IP1Q9NPC3 277 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 INIPQ9NRY2 104 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 DDX28Q9NUL7 540 aaKnown RBP13.68□□□□□ -0.22
SRRT-212ENST00000487311 ZNF69Q9UC07 566 aa13.68□□□□□ -0.22
SRRT-212ENST00000487311 MCIDASD6RGH6 385 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 SHOX2O60902 331 aaPredicted RBP13.67□□□□□ -0.22
SRRT-212ENST00000487311 OR7A10O76100 309 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 SBK2P0C263 348 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 FPR2P25090 351 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 SEC61A1P61619 476 aaKnown RBP13.67□□□□□ -0.22
SRRT-212ENST00000487311 KLF17Q5JT82 389 aaPredicted RBP13.67□□□□□ -0.22
SRRT-212ENST00000487311 RFPL4BQ6ZWI9 263 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 DHDDSQ86SQ9 333 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 DPP10Q8N608 796 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 OR10A6Q8NH74 314 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 ZNF48Q96MX3 618 aaPredicted RBP13.67□□□□□ -0.22
SRRT-212ENST00000487311 WNT5BQ9H1J7 359 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 KCNN2Q9H2S1 579 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 NTN4Q9HB63 628 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 EIF3KQ9UBQ5 218 aaKnown RBP13.67□□□□□ -0.22
SRRT-212ENST00000487311 EGFL7Q9UHF1 273 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 NDUFAF1Q9Y375 327 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 SOX21Q9Y651 276 aaPredicted RBP13.67□□□□□ -0.22
SRRT-212ENST00000487311 CMYA5Q8N3K9 4069 aa13.67□□□□□ -0.22
SRRT-212ENST00000487311 CENPBD1B2RD01 187 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 IGHV2-70P01814 119 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 SCG5P05408 212 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 ADH4P08319 380 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 FUT4P22083 530 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 LAP3P28838 519 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 GDI2P50395 445 aaKnown RBP13.66□□□□□ -0.22
SRRT-212ENST00000487311 PPP1CBP62140 327 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 FAM27BQ5VT28 67 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 PATL1Q86TB9 770 aaKnown RBP13.66□□□□□ -0.22
SRRT-212ENST00000487311 ABHD4Q8TB40 342 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 SGTBQ96EQ0 304 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 THOC1Q96FV9 657 aaKnown RBP13.66□□□□□ -0.22
SRRT-212ENST00000487311 OR2H1Q9GZK4 316 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 POFUT1Q9H488 388 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 ZNF696Q9H7X3 374 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 NPTNQ9Y639 398 aa13.66□□□□□ -0.22
SRRT-212ENST00000487311 PPIAL4EA0A075B759 164 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PPIAL4CA0A0B4J2A2 164 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PLSCR5A0PG75 271 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PPIAL4DF5H284 164 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PPIAL4FP0DN26 164 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PRTN3P24158 256 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PCGF2P35227 344 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 DAP3P51398 398 aaKnown RBP13.65□□□□□ -0.22
SRRT-212ENST00000487311 FOXL1Q12952 345 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PSG7Q13046 419 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 ZNF154Q13106 437 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PIN1Q13526 163 aaPredicted RBP13.65□□□□□ -0.22
SRRT-212ENST00000487311 CCDC80Q76M96 950 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 DOK3Q7L591 496 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 LRRC8CQ8TDW0 803 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 ST7LQ8TDW4 575 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 SLC26A7Q8TE54 656 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 EGLN1Q9GZT9 426 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 RIMS3Q9UJD0 308 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PURGQ9UJV8 347 aaKnown RBP13.65□□□□□ -0.22
SRRT-212ENST00000487311 SH3GLB1Q9Y371 365 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 TANC2Q9HCD6 1990 aa13.65□□□□□ -0.22
SRRT-212ENST00000487311 PIP5K1CO60331 668 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 FOXH1O75593 365 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 CD55P08174 381 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 OR1E2P47887 323 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 SLC6A9P48067 706 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 SLC3A1Q07837 685 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 CD47Q08722 323 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 CDK5R2Q13319 367 aa13.64□□□□□ -0.23
SRRT-212ENST00000487311 VMACQ2NL98 169 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms