RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 DOK1Q99704 481 aa11.1□□□□□ -0.63
CHMP3-208ENST00000486404 RERGLQ9H628 205 aa11.1□□□□□ -0.63
CHMP3-208ENST00000486404 REV1Q9UBZ9 1251 aa11.1□□□□□ -0.63
CHMP3-208ENST00000486404 DUSP13Q9UII6 198 aa11.1□□□□□ -0.63
CHMP3-208ENST00000486404 GPR160Q9UJ42 338 aa11.1□□□□□ -0.63
CHMP3-208ENST00000486404 TMCC3Q9ULS5 477 aa11.1□□□□□ -0.63
CHMP3-208ENST00000486404 YLPM1P49750 1951 aaKnown RBP11.1□□□□□ -0.63
CHMP3-208ENST00000486404 RTTNQ86VV8 2226 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 SONP18583 2426 aaKnown RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 TLX2O43763 284 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 OR10H3O60404 316 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 STAMBPO95630 424 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 FAM107AO95990 144 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 CST2P09228 141 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 MMP7P09237 267 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 ZNF16P17020 682 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 STOMP27105 288 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 LAP3P28838 519 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 SDHAP31040 664 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 IFNGR2P38484 337 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 RAD52P43351 418 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 ALDH3B1P43353 468 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 LIMS1P48059 325 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 GDI2P50395 445 aaKnown RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 RPS6KA3P51812 740 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 KLF3P57682 345 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 FHL1Q13642 323 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 MAD2L1BPQ15013 274 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 SEC23BQ15437 767 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 GPR139Q6DWJ6 353 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 UNQ6126/PRO20091Q6UXV3 157 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 ADCK1Q86TW2 530 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 PAQR4Q8N4S7 273 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 ZNF540Q8NDQ6 660 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 AKR7LQ8NHP1 331 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 RASD2Q96D21 266 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 DHRS1Q96LJ7 313 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 Q96M85 177 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 BCL2L14Q9BZR8 327 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 MS4A5Q9H3V2 200 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 EIF3KQ9UBQ5 218 aaKnown RBP11.09□□□□□ -0.63
CHMP3-208ENST00000486404 CD300AQ9UGN4 299 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 IL20RAQ9UHF4 553 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 SIGLEC7Q9Y286 467 aa11.09□□□□□ -0.63
CHMP3-208ENST00000486404 A0A096LNT2 108 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 PRSS37A4D1T9 235 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 C5orf49A4QMS7 147 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 C12orf71A8MTZ7 269 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 B2RBV5 119 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 SOCS2O14508 198 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 AHCYL1O43865 530 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 MT-ND5P03915 603 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 SEMG1P04279 462 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 APEHP13798 732 aaKnown RBP11.08□□□□□ -0.64
CHMP3-208ENST00000486404 ATP6V1B2P21281 511 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 CALB2P22676 271 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 RRM2P31350 389 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 SLC6A6P31641 620 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 NR4A2P43354 598 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 OMPP47874 163 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 MSMPQ1L6U9 139 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 MTX3Q5HYI7 312 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 FAM27BQ5VT28 67 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 SMARCD3Q6STE5 483 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 CYP2R1Q6VVX0 501 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 JAZF1Q86VZ6 243 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 ZDHHC21Q8IVQ6 265 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 ARHGAP24Q8N264 748 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 ZCCHC24Q8N2G6 241 aaKnown RBP11.08□□□□□ -0.64
CHMP3-208ENST00000486404 FITM2Q8N6M3 262 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 SYNPRQ8TBG9 265 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 C11orf40Q8WZ69 217 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 NSL1Q96IY1 281 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 GPX7Q96SL4 187 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-208ENST00000486404 OR2H1Q9GZK4 316 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 BPESC1Q9GZL8 116 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 SYT4Q9H2B2 425 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 MUC13Q9H3R2 512 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 POLE4Q9NR33 117 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 POLR1DQ9Y2S0 133 aa11.08□□□□□ -0.64
CHMP3-208ENST00000486404 TMEM129A0AVI4 362 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 A8MV72 311 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-208ENST00000486404 DOK2O60496 412 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 PPP1R3DO95685 299 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 FPR3P25089 353 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 UCP2P55851 309 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 ERVS71-1P61550 626 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 GLO1Q04760 184 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 SCRN3Q0VDG4 424 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 ALKBH6Q3KRA9 238 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 C6orf52Q5T4I8 152 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 TMEM154Q6P9G4 183 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 DNM1P34Q6PK57 102 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 DPY19L2P2Q6ZN68 376 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 FAM122BQ7Z309 247 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 LRP11Q86VZ4 500 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 OR1J1Q8NGS3 322 aa11.07□□□□□ -0.64
CHMP3-208ENST00000486404 UBASH3BQ8TF42 649 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms