RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 RDH10Q8IZV5 341 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 PRSS35Q8N3Z0 413 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 ZNF676Q8N7Q3 588 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 C19orf18Q8NEA5 215 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 DUSP18Q8NEJ0 188 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 IL17RDQ8NFM7 739 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 TRIM63Q969Q1 353 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 AMELYQ99218 206 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 WACQ9BTA9 647 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 SF3B5Q9BWJ5 86 aaKnown RBP10.68□□□□□ -0.7
PKP4-213ENST00000486254 ABCG5Q9H222 651 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 MOB1AQ9H8S9 216 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 TCF7L1Q9HCS4 588 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 RBFOX1Q9NWB1 397 aaKnown RBP10.68□□□□□ -0.7
PKP4-213ENST00000486254 MED29Q9NX70 200 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 DKKL1Q9UK85 242 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 PCDHGA9Q9Y5G4 932 aaKnown RBP10.68□□□□□ -0.7
PKP4-213ENST00000486254 PCNX2A6NKB5 2137 aa10.68□□□□□ -0.7
PKP4-213ENST00000486254 KIAA1549Q9HCM3 1950 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 ACOD1A6NK06 481 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.67□□□□□ -0.7
PKP4-213ENST00000486254 GSTZ1O43708 216 aaPredicted RBP10.67□□□□□ -0.7
PKP4-213ENST00000486254 SLC43A1O75387 559 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 P04436 131 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 PRKAR1AP10644 381 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 ZNF43P17038 809 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 ACHEP22303 614 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 CD82P27701 267 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 MMP15P51511 669 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 AGFG1P52594 562 aaKnown RBP10.67□□□□□ -0.7
PKP4-213ENST00000486254 MRPS10P82664 201 aaKnown RBP10.67□□□□□ -0.7
PKP4-213ENST00000486254 ETFDHQ16134 617 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 TMEM176BQ3YBM2 270 aaPredicted RBP10.67□□□□□ -0.7
PKP4-213ENST00000486254 SLC25A47Q6Q0C1 308 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 ZNF704Q6ZNC4 412 aaPredicted RBP10.67□□□□□ -0.7
PKP4-213ENST00000486254 PIP4P1Q86T03 277 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 LRRTM1Q86UE6 522 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 SUMF1Q8NBK3 374 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 OR4M1Q8NGD0 313 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 ADAMTS17Q8TE56 1095 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 SNRNP27Q8WVK2 155 aaKnown RBP10.67□□□□□ -0.7
PKP4-213ENST00000486254 RAB40AQ8WXH6 277 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 NAA11Q9BSU3 229 aaPredicted RBP10.67□□□□□ -0.7
PKP4-213ENST00000486254 B3GAT2Q9NPZ5 323 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 CYB5R1Q9UHQ9 305 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 FOXJ3Q9UPW0 622 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 CAMK2AQ9UQM7 478 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 LRP12Q9Y561 859 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 R4GN57 208 aa10.67□□□□□ -0.7
PKP4-213ENST00000486254 DOCK10Q96BY6 2186 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 A0A1W2PNU3 283 aaPredicted RBP10.66□□□□□ -0.7
PKP4-213ENST00000486254 OR2M5A3KFT3 312 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 SHISA8B8ZZ34 492 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 PSMD9O00233 223 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 PLA2G10O15496 165 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 SULT1B1O43704 296 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 CD2P06729 351 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 UBCP0CG48 685 aaKnown RBP10.66□□□□□ -0.7
PKP4-213ENST00000486254 SPNP16150 400 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 MAP2K3P46734 347 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 CAPZA1P52907 286 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 CLRN1P58418 232 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 FMODQ06828 376 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 C10orf128Q5T292 105 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 AGAP6Q5VW22 663 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 TMEM225Q6GV28 225 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 FOXL2NBQ6ZUU3 175 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 KDM8Q8N371 416 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 OR10H5Q8NGA6 315 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 PSMF1Q92530 271 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 TMEM106AQ96A25 262 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 RFT1Q96AA3 541 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 INTS12Q96CB8 462 aaKnown RBP10.66□□□□□ -0.7
PKP4-213ENST00000486254 AGAP4Q96P64 663 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 GFI1Q99684 422 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 C7orf50Q9BRJ6 194 aaKnown RBP10.66□□□□□ -0.7
PKP4-213ENST00000486254 OR2B2Q9GZK3 357 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 C11orf54Q9H0W9 315 aaPredicted RBP10.66□□□□□ -0.7
PKP4-213ENST00000486254 ZNF275Q9NSD4 429 aaPredicted RBP10.66□□□□□ -0.7
PKP4-213ENST00000486254 ANKRD10Q9NXR5 420 aa10.66□□□□□ -0.7
PKP4-213ENST00000486254 A0A0G2JMP0 313 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 A0A0X1KG70 313 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 A0A1W2PNR3 127 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 MEGF11A6BM72 1044 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 GPANK1O95872 356 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 FAM157BP0CG42 384 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 RANBP1P43487 201 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 CYB561P49447 251 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 SUCLG1P53597 346 aaKnown RBP10.65□□□□□ -0.7
PKP4-213ENST00000486254 B3GALT5-AS1P59052 145 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 RAC3P60763 192 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 RPS18P62269 152 aaKnown RBP10.65□□□□□ -0.7
PKP4-213ENST00000486254 C19orf57Q0VDD7 668 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 TOMM20Q15388 145 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 CSRP2Q16527 193 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 TMEM244Q5VVB8 128 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 RAET1LQ5VY80 246 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 LRRC69Q6ZNQ3 347 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 DCXRQ7Z4W1 244 aa10.65□□□□□ -0.7
PKP4-213ENST00000486254 CDH24Q86UP0 819 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms