RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 VWC2LB2RUY7 222 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 SNAP29O95721 258 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 TP53P04637 393 aaPredicted RBP16.8■□□□□ 0.28
SNX5-213ENST00000486039 SMIM11AP58511 58 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 RPS23P62266 143 aaKnown RBP16.8■□□□□ 0.28
SNX5-213ENST00000486039 PSG4Q00888 419 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 HSF2Q03933 536 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 TBC1D28Q2M2D7 210 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 OR1J2Q8NGS2 313 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 RASD2Q96D21 266 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 ZNF570Q96NI8 536 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 DYNLRB1Q9NP97 96 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 KRCC1Q9NPI7 259 aaPredicted RBP16.8■□□□□ 0.28
SNX5-213ENST00000486039 ACTR3BQ9P1U1 418 aa16.8■□□□□ 0.28
SNX5-213ENST00000486039 A0A1W2PPL8 197 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 PRSS37A4D1T9 235 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 XKRYO14609 159 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 IMPA2O14732 288 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 CD5LO43866 347 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 CST2P09228 141 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 CALB2P22676 271 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 RRM2P31350 389 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 APLNRP35414 380 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 ERVS71-1P61550 626 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 KRR1Q13601 381 aaKnown RBP16.79■□□□□ 0.28
SNX5-213ENST00000486039 ENDOGQ14249 297 aaKnown RBP16.79■□□□□ 0.28
SNX5-213ENST00000486039 ZDHHC21Q8IVQ6 265 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 AKR7LQ8NHP1 331 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 NEU4Q8WWR8 484 aaPredicted RBP16.79■□□□□ 0.28
SNX5-213ENST00000486039 FOXN4Q96NZ1 517 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 NDEL1Q9GZM8 345 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 OR51B6Q9H340 312 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 TPK1Q9H3S4 243 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 MYOZ1Q9NP98 299 aaPredicted RBP16.79■□□□□ 0.28
SNX5-213ENST00000486039 IER3IP1Q9Y5U9 82 aa16.79■□□□□ 0.28
SNX5-213ENST00000486039 TCRBV5S2A0A599 114 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 NDUFS8O00217 210 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 SYNGR3O43761 229 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 TLX2O43763 284 aaPredicted RBP16.78■□□□□ 0.28
SNX5-213ENST00000486039 AHCYL1O43865 530 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 CTLA4P16410 223 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 STOMP27105 288 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 SDHAP31040 664 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 ALDH3B1P43353 468 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 UCP2P55851 309 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 MAD2L1BPQ15013 274 aaPredicted RBP16.78■□□□□ 0.28
SNX5-213ENST00000486039 CARTPTQ16568 116 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 TMEM249Q2WGJ8 235 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 GPR139Q6DWJ6 353 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 RGS7BPQ6MZT1 257 aaPredicted RBP16.78■□□□□ 0.28
SNX5-213ENST00000486039 UGT2A3Q6UWM9 527 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 DPY19L2P2Q6ZN68 376 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 ARHGAP24Q8N264 748 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 POM121L2Q96KW2 1035 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 PIMREGQ9BSJ6 248 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 ZNF416Q9BWM5 594 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 OR2H1Q9GZK4 316 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 WNT5BQ9H1J7 359 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 LRMDAQ9H2I8 198 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 POLE4Q9NR33 117 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 REV1Q9UBZ9 1251 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 DUSP13Q9UII6 198 aa16.78■□□□□ 0.28
SNX5-213ENST00000486039 CHD3Q12873 2000 aaKnown RBP16.78■□□□□ 0.28
SNX5-213ENST00000486039 LOC100509620A0A075B734 347 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 LOC390937A0A1W2PQ73 354 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 M0R233 179 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 OR10H3O60404 316 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 STAMBPO95630 424 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 TXNDC12O95881 172 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 CLPTM1O96005 669 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 DAOP14920 347 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 MSR1P21757 451 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 USF1P22415 310 aaPredicted RBP16.77■□□□□ 0.28
SNX5-213ENST00000486039 CCNOP22674 350 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 GUCA1AP43080 201 aaPredicted RBP16.77■□□□□ 0.28
SNX5-213ENST00000486039 RAD52P43351 418 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 NR4A2P43354 598 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 MS4A2Q01362 244 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 SMARCD3Q6STE5 483 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 PTCHD4Q6ZW05 846 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 SYT4Q9H2B2 425 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 EMC7Q9NPA0 242 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 YAE1D1Q9NRH1 226 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 VSX1Q9NZR4 365 aaPredicted RBP16.77■□□□□ 0.28
SNX5-213ENST00000486039 TIMM10BQ9Y5J6 103 aa16.77■□□□□ 0.28
SNX5-213ENST00000486039 SOCS2O14508 198 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 LCKP06239 509 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 ERCC1P07992 297 aaPredicted RBP16.76■□□□□ 0.27
SNX5-213ENST00000486039 ZNF250P15622 560 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 FPR3P25089 353 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 WNT5AP41221 380 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 CDKN2AP42771 156 aaKnown RBP16.76■□□□□ 0.27
SNX5-213ENST00000486039 RPS6KA3P51812 740 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 TRIM25Q14258 630 aaKnown RBP16.76■□□□□ 0.27
SNX5-213ENST00000486039 RFX4Q33E94 735 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 MTX3Q5HYI7 312 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 LCN8Q6JVE9 175 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 C1orf94Q6P1W5 598 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 BCL2L14Q9BZR8 327 aa16.76■□□□□ 0.27
SNX5-213ENST00000486039 OR52D1Q9H346 318 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms