RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CPEB3Q8NE35 698 aaKnown RBP10.57□□□□□ -0.72
MSH5-216ENST00000484309 FANK1Q8TC84 345 aa10.57□□□□□ -0.72
MSH5-216ENST00000484309 CLPTM1LQ96KA5 538 aa10.57□□□□□ -0.72
MSH5-216ENST00000484309 NDEL1Q9GZM8 345 aa10.57□□□□□ -0.72
MSH5-216ENST00000484309 KRCC1Q9NPI7 259 aaPredicted RBP10.57□□□□□ -0.72
MSH5-216ENST00000484309 SLC7A8Q9UHI5 535 aa10.57□□□□□ -0.72
MSH5-216ENST00000484309 DUSP13Q9UII6 198 aa10.57□□□□□ -0.72
MSH5-216ENST00000484309 ADAM21Q9UKJ8 722 aa10.57□□□□□ -0.72
MSH5-216ENST00000484309 IER3IP1Q9Y5U9 82 aa10.57□□□□□ -0.72
MSH5-216ENST00000484309 SLC22A23A1A5C7 686 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 OR10H3O60404 316 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 PPP1R3DO95685 299 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 CLPTM1O96005 669 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 LCKP06239 509 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 CTLA4P16410 223 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 CALB2P22676 271 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 APLNRP35414 380 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 PDLIM4P50479 330 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 SMIM11AP58511 58 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 DSCR9P59020 149 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 RPS23P62266 143 aaKnown RBP10.56□□□□□ -0.72
MSH5-216ENST00000484309 PSG4Q00888 419 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 DBPQ10586 325 aaPredicted RBP10.56□□□□□ -0.72
MSH5-216ENST00000484309 PPP1R8Q12972 351 aaKnown RBP10.56□□□□□ -0.72
MSH5-216ENST00000484309 GGTLC2Q14390 218 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 FAM27BQ5VT28 67 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 RGS7BPQ6MZT1 257 aaPredicted RBP10.56□□□□□ -0.72
MSH5-216ENST00000484309 UGT2A3Q6UWM9 527 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 PTCHD4Q6ZW05 846 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 DPPA2Q7Z7J5 298 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 ZER1Q7Z7L7 766 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 FNDC8Q8TC99 324 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 CCDC124Q96CT7 223 aaKnown RBP10.56□□□□□ -0.72
MSH5-216ENST00000484309 ZNF416Q9BWM5 594 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 RAB1BQ9H0U4 201 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 SYT4Q9H2B2 425 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 C1orf198Q9H425 327 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 NRIP3Q9NQ35 241 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 FAM53CQ9NYF3 392 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 ACTR3BQ9P1U1 418 aa10.56□□□□□ -0.72
MSH5-216ENST00000484309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.55□□□□□ -0.722e-7■■■■■ 27.8
MSH5-216ENST00000484309 A0A1W2PPW3 197 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 TCRBV5S2A0A599 114 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 PRSS37A4D1T9 235 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 LYNX1G3V0Z9 82 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 M0R233 179 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 TP53P04637 393 aaPredicted RBP10.55□□□□□ -0.72
MSH5-216ENST00000484309 CST2P09228 141 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 CSF3P09919 207 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 LYNX1P0DP58 116 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 SLC25A16P16260 332 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 MSR1P21757 451 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 STOMP27105 288 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 SDHAP31040 664 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 GUCA1AP43080 201 aaPredicted RBP10.55□□□□□ -0.72
MSH5-216ENST00000484309 PPP2R2BQ00005 443 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 MS4A2Q01362 244 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 GLO1Q04760 184 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 ENDOGQ14249 297 aaKnown RBP10.55□□□□□ -0.72
MSH5-216ENST00000484309 SPATS1Q496A3 300 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 SPATA46Q5T0L3 261 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 ZNF774Q6NX45 483 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 SMARCD3Q6STE5 483 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 FOXL2NBQ6ZUU3 175 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 DHFR2Q86XF0 187 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 OR9Q2Q8NGE9 314 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 OR1J2Q8NGS2 313 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 ERMAPQ96PL5 475 aaPredicted RBP10.55□□□□□ -0.72
MSH5-216ENST00000484309 GPX7Q96SL4 187 aaPredicted RBP10.55□□□□□ -0.72
MSH5-216ENST00000484309 PIMREGQ9BSJ6 248 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 OR2H1Q9GZK4 316 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 WNT5BQ9H1J7 359 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 LRMDAQ9H2I8 198 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 OR52D1Q9H346 318 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 IL1RAPQ9NPH3 570 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 POLE4Q9NR33 117 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 YAE1D1Q9NRH1 226 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 TMCC3Q9ULS5 477 aa10.55□□□□□ -0.72
MSH5-216ENST00000484309 JMJD1CQ15652 2540 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 LOC100509620A0A075B734 347 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 C5orf49A4QMS7 147 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 SYNGR3O43761 229 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 SLC16A7O60669 478 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 MPZL1O95297 269 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 SNAP29O95721 258 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 GPANK1O95872 356 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 PTHP01270 115 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 ERCC1P07992 297 aaPredicted RBP10.54□□□□□ -0.72
MSH5-216ENST00000484309 NAT2P11245 290 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 DAOP14920 347 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 WNT5AP41221 380 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 CDKN2AP42771 156 aaKnown RBP10.54□□□□□ -0.72
MSH5-216ENST00000484309 CENPAP49450 140 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 GDI2P50395 445 aaKnown RBP10.54□□□□□ -0.72
MSH5-216ENST00000484309 RPS6KA3P51812 740 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 TRIM25Q14258 630 aaKnown RBP10.54□□□□□ -0.72
MSH5-216ENST00000484309 TMEM249Q2WGJ8 235 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 GPR139Q6DWJ6 353 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 LCN8Q6JVE9 175 aa10.54□□□□□ -0.72
MSH5-216ENST00000484309 PGBD2Q6P3X8 592 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms