RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 OCLNQ16625 522 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 FBXL19-AS1Q494R0 122 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 LAIR2Q6ISS4 152 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 FOXL2NBQ6ZUU3 175 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 SKA3Q8IX90 412 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 SETD9Q8NE22 299 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 SLC26A10Q8NG04 563 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 RNASE6Q93091 150 aaKnown RBP12.37□□□□□ -0.43
SRSF6-202ENST00000483871 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 POLE4Q9NR33 117 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 MOKQ9UQ07 419 aa12.37□□□□□ -0.43
SRSF6-202ENST00000483871 USP9XQ93008 2570 aaPredicted RBP12.37□□□□□ -0.43
SRSF6-202ENST00000483871 APOL3O95236 402 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 OR8G3PP0DMU2 310 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 PSKH1P11801 424 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 MYF6P23409 242 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 IL32P24001 234 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 GUCA1AP43080 201 aaPredicted RBP12.36□□□□□ -0.43
SRSF6-202ENST00000483871 CDH11P55287 796 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 TEKQ02763 1124 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 TBRG1Q3YBR2 411 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 SLC25A30Q5SVS4 291 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 ANKRD16Q6P6B7 361 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 ZNF627Q7L945 461 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 OR52N5Q8NH56 324 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 SSC4DQ8WTU2 575 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 ACTR6Q9GZN1 396 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 SIAEQ9HAT2 523 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 NPDC1Q9NQX5 325 aaPredicted RBP12.36□□□□□ -0.43
SRSF6-202ENST00000483871 CLN6Q9NWW5 311 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 ZNF224Q9NZL3 707 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 HSPE1-MOB4S4R3N1 261 aa12.36□□□□□ -0.43
SRSF6-202ENST00000483871 CLEC18AA5D8T8 446 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 C19orf84I3L1E1 186 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 SELENOFO60613 162 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 MRPL3P09001 348 aaKnown RBP12.35□□□□□ -0.43
SRSF6-202ENST00000483871 NPR2P20594 1047 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 MSR1P21757 451 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 CAPZA2P47755 286 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 HCCSP53701 268 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 SH3BGRP55822 239 aaPredicted RBP12.35□□□□□ -0.43
SRSF6-202ENST00000483871 PIGFQ07326 219 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 ENDOGQ14249 297 aaKnown RBP12.35□□□□□ -0.43
SRSF6-202ENST00000483871 SLC35D3Q5M8T2 416 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 FAM27BQ5VT28 67 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 MEDAGQ5VYS4 303 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 OR7E24Q6IFN5 339 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 ALKBH2Q6NS38 261 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 CORO6Q6QEF8 472 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 CLEC18BQ6UXF7 455 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 GID4Q8IVV7 300 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 WDR31Q8NA23 367 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 CLEC18CQ8NCF0 446 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 FBLIM1Q8WUP2 373 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 ZNF416Q9BWM5 594 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 HDHD5Q9BXW7 423 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 COMMD3-BMI1R4GMX3 469 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 RTTNQ86VV8 2226 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 OR5H1A6NKK0 313 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 SLC22A31A6NKX4 558 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 HLA-HP01893 362 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 HTR1FP30939 366 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 NAA10P41227 235 aaPredicted RBP12.35□□□□□ -0.43
SRSF6-202ENST00000483871 ADAM8P78325 824 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 SHFQ7M4L6 423 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 ERI1Q8IV48 349 aaKnown RBP12.35□□□□□ -0.43
SRSF6-202ENST00000483871 LINC00346Q8IVM7 164 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 TIGD4Q8IY51 512 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 LINC01560Q8TB33 94 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 C1QTNF6Q9BXI9 259 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 SLC17A5Q9NRA2 495 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 UBAP1Q9NZ09 502 aa12.35□□□□□ -0.43
SRSF6-202ENST00000483871 ZNF593O00488 134 aaPredicted RBP12.34□□□□□ -0.43
SRSF6-202ENST00000483871 DENRO43583 198 aaKnown RBP12.34□□□□□ -0.43
SRSF6-202ENST00000483871 XPNPEP2O43895 674 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 FARS2O95363 451 aaKnown RBP12.34□□□□□ -0.43
SRSF6-202ENST00000483871 TAB1Q15750 504 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 KCNMB1Q16558 191 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 NRN1LQ496H8 165 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 DPY19L4Q7Z388 723 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 C1orf162Q8NEQ5 155 aaPredicted RBP12.34□□□□□ -0.43
SRSF6-202ENST00000483871 BPIFB6Q8NFQ5 453 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 STEAP2Q8NFT2 490 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 OR4F15Q8NGB8 312 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 OR51G2Q8NGK0 314 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 OR6N2Q8NGY6 317 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 RFKQ969G6 155 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 ZC3HAV1LQ96H79 300 aaKnown RBP12.34□□□□□ -0.43
SRSF6-202ENST00000483871 BOD1Q96IK1 185 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 Q96MT0 163 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 RHNO1Q9BSD3 238 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 CDADC1Q9BWV3 514 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 NOX3Q9HBY0 568 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 ASH2LQ9UBL3 628 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.34□□□□□ -0.43
SRSF6-202ENST00000483871 LRRC42Q9Y546 428 aa12.34□□□□□ -0.43
SRSF6-202ENST00000483871 HRGP04196 525 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms