RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ITCHQ96J02 903 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 LRR1Q96L50 414 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 OR2M2Q96R28 347 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 EPYCQ99645 322 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 TMEM109Q9BVC6 243 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 PTDSS2Q9BVG9 487 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 RBM4Q9BWF3 364 aaKnown RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 TMEM120AQ9BXJ8 343 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 MRPL37Q9BZE1 423 aaKnown RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ULBP2Q9BZM5 246 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 C20orf27Q9GZN8 174 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 RAD21L1Q9H4I0 556 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 DENND2DQ9H6A0 471 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF385DQ9H6B1 395 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 LPAR2Q9HBW0 351 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 SLC52A3Q9NQ40 469 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 TREM2Q9NZC2 230 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 B3GAT1Q9P2W7 334 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 SEC14L4Q9UDX3 406 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 MALRD1Q5VYJ5 2156 aa5.03□□□□□ -1.6
CSDE1-207ENST00000483407 NUP214P35658 2090 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-207ENST00000483407 ARFGEF3Q5TH69 2177 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 A0A087WUJ7 227 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 A0A1B0GWA3 101 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 SLC22A23A1A5C7 686 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 TMEM89A2RUT3 159 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 FAM157AC9JC47 383 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 HDAC3O15379 428 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 FZD7O75084 574 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 PNPP00491 289 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF35P13682 527 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 B4GALT1P15291 398 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF14P17017 642 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 CBLP22681 906 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 AHCYP23526 432 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 COL8A2P25067 703 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 EPHA3P29320 983 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 PRKAR1BP31321 381 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 MVDP53602 400 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 SEC24CP53992 1094 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 HILS1P60008 231 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 VSNL1P62760 191 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 MYBPC1Q00872 1141 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 PIGFQ07326 219 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 BST1Q10588 318 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 FADDQ13158 208 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 PMS2P3Q13401 168 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 CAMK2DQ13557 499 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 MAD2L1BPQ15013 274 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF124Q15973 351 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 MMEL1Q495T6 779 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 GLIPR1L2Q4G1C9 344 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 PLA1AQ53H76 456 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 FAM91A1Q658Y4 838 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 RGS7BPQ6MZT1 257 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ACSM5Q6NUN0 579 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 FAHD2BQ6P2I3 314 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ULK3Q6PHR2 472 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF627Q7L945 461 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 PEG10Q86TG7 708 aaKnown RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 KRT73Q86Y46 540 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 C10orf53Q8N6V4 93 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 LSMEM1Q8N8F7 131 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 SCAIQ8N9R8 606 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ATG16L2Q8NAA4 619 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 OR6S1Q8NH40 331 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 TAAR8Q969N4 342 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 RAB39BQ96DA2 213 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 SLC47A1Q96FL8 570 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 FAHD2AQ96GK7 314 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 MARS2Q96GW9 593 aaKnown RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 NEU1Q99519 415 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 PAIP2Q9BPZ3 127 aaKnown RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 EMC6Q9BV81 110 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 RACGAP1Q9H0H5 632 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 WDR55Q9H6Y2 383 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 BCL2L10Q9HD36 194 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 KCNK9Q9NPC2 374 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 A4GALTQ9NPC4 353 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ZNF275Q9NSD4 429 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 B3GNT2Q9NY97 397 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 VSX1Q9NZR4 365 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 SLC7A8Q9UHI5 535 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 SLC13A4Q9UKG4 626 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 GTF2A1LQ9UNN4 478 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 CHST2Q9Y4C5 530 aa5.02□□□□□ -1.61
CSDE1-207ENST00000483407 HEATR1Q9H583 2144 aaKnown RBP5.02□□□□□ -1.61
CSDE1-207ENST00000483407 ANK2Q01484 3957 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 IGKV1D-42A0A075B6H8 117 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 A0A0G2JMP0 313 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 A0A0X1KG70 313 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 PRORSD1PA6NEY8 169 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 MS4A18H0YCH9 400 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 J3QLI3 93 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 CLIC1O00299 241 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 SERPINI2O75830 405 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 OR6A2O95222 327 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 MPZL1O95297 269 aa5.01□□□□□ -1.61
CSDE1-207ENST00000483407 FARS2O95363 451 aaKnown RBP5.01□□□□□ -1.61
CSDE1-207ENST00000483407 BCL10O95999 233 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms