RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 HIST1H2ABP04908 130 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 MMP7P09237 267 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF12P17014 697 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 HOXB9P17482 250 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 MDKP21741 143 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 OMGP23515 440 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 SLC6A2P23975 617 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 STOMP27105 288 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 PCGF2P35227 344 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 WNT5AP41221 380 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 SLC6A9P48067 706 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF84P51523 738 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 WDR4P57081 412 aaKnown RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 CLRN1P58418 232 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 SEC61A1P61619 476 aaKnown RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 COX10Q12887 443 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 SCARB2Q14108 478 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF74Q16587 644 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF613Q6PF04 617 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 HIST3H2AQ7L7L0 130 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 MAVSQ7Z434 540 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 RANBP3LQ86VV4 465 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 ARMC8Q8IUR7 673 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 MSRB3Q8IXL7 192 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF101Q8IZC7 436 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 KLHL36Q8N4N3 616 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 SMYD1Q8NB12 490 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 HIPK4Q8NE63 616 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 AKR7LQ8NHP1 331 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 SLC25A40Q8TBP6 338 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 KLF14Q8TD94 323 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 IPCEF1Q8WWN9 437 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 HIST1H2ACQ93077 130 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 MAELQ96JY0 434 aaKnown RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 POM121L2Q96KW2 1035 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF607Q96SK3 696 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 RSRP1Q9BUV0 290 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 MRI1Q9BV20 369 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 OR2J1Q9GZK6 312 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 MS4A7Q9GZW8 240 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-206ENST00000483030 SLITRK2Q9H156 845 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 KCNN2Q9H2S1 579 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 MSL2Q9HCI7 577 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 KLHL21Q9UJP4 597 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 TRIM33Q9UPN9 1127 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 INSIG2Q9Y5U4 225 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 NPTNQ9Y639 398 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 TRRAPQ9Y4A5 3859 aa6.23□□□□□ -1.41
CSDE1-206ENST00000483030 WNK2Q9Y3S1 2297 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 CPSF4LA6NMK7 179 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 CLDN34H7C241 214 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 KPNA4O00629 521 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 CHP2O43745 196 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 FMO6PO60774 539 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 SNNO75324 88 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 MTRF1O75570 445 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 LYPD3O95274 346 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 NGFP01138 241 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 IGHMP01871 453 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 THY1P04216 161 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 F13BP05160 661 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ADH4P08319 380 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ASAH2BP0C7U1 165 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 IGHV4-38-2P0DP08 117 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 UMPSP11172 480 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ACADSP16219 412 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ZNF32P17041 273 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 CDAP32320 146 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 CD80P33681 288 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 LIPAP38571 399 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 GDI2P50395 445 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 PPP1CBP62140 327 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 TNFAIP6P98066 277 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 PSG4Q00888 419 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 SRSF4Q08170 494 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 NPTX1Q15818 432 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 SGCAQ16586 387 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 HIST3H3Q16695 136 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 DUSP7Q16829 419 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 NRN1LQ496H8 165 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 PAGE3Q5JUK9 113 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ENTPD8Q5MY95 495 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 LRIF1Q5T3J3 769 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 MBNL2Q5VZF2 373 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 TTC33Q6PID6 262 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 SPATC1Q76KD6 591 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 LRRC28Q86X40 367 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 RBM45Q8IUH3 476 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 FUNDC1Q8IVP5 155 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 SPICQ8N5J4 248 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 BHLHE22Q8NFJ8 381 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 OR52E2Q8NGJ4 325 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 OR6T1Q8NGN1 323 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ABHD4Q8TB40 342 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 TMIGD2Q96BF3 282 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 RSRC1Q96IZ7 334 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 ARHGDIGQ99819 225 aa6.22□□□□□ -1.41
CSDE1-206ENST00000483030 MRPL13Q9BYD1 178 aaKnown RBP6.22□□□□□ -1.41
CSDE1-206ENST00000483030 RASSF4Q9H2L5 321 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms