RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ADAM18Q9Y3Q7 739 aa11.96□□□□□ -0.49
VARS-225ENST00000482996 RTTNQ86VV8 2226 aa11.96□□□□□ -0.49
VARS-225ENST00000482996 LOC390937A0A1W2PQ73 354 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 INAFM1C9JVW0 142 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 CD5LO43866 347 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 PTP4A3O75365 173 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 CST2P09228 141 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 FAM157BP0CG42 384 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 CCL2P13500 99 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 ZNF32P17041 273 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 APEX1P27695 318 aaKnown RBP11.95□□□□□ -0.5
VARS-225ENST00000482996 LAP3P28838 519 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 IFNGR2P38484 337 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 RAD52P43351 418 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 KRTAP1-1Q07627 177 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 BNIP1Q12981 228 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 KRR1Q13601 381 aaKnown RBP11.95□□□□□ -0.5
VARS-225ENST00000482996 IQCCQ4KMZ1 466 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 MTX3Q5HYI7 312 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 ALDH16A1Q8IZ83 802 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 ZNF540Q8NDQ6 660 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 GPX7Q96SL4 187 aaPredicted RBP11.95□□□□□ -0.5
VARS-225ENST00000482996 SYT3Q9BQG1 590 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 BCL2L14Q9BZR8 327 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 MUC13Q9H3R2 512 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 MS4A5Q9H3V2 200 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 IL1RAPQ9NPH3 570 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 ACTR3BQ9P1U1 418 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 REV1Q9UBZ9 1251 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 DUSP13Q9UII6 198 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 GPR160Q9UJ42 338 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 ABCA2Q9BZC7 2435 aa11.95□□□□□ -0.5
VARS-225ENST00000482996 CR1P17927 2039 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 A0A096LNT2 108 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 TEX13CA0A0J9YWL9 993 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 A0A1W2PPW3 197 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 PRSS37A4D1T9 235 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 C12orf71A8MTZ7 269 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 H7C1C5 153 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 TLX2O43763 284 aaPredicted RBP11.94□□□□□ -0.5
VARS-225ENST00000482996 OR10H3O60404 316 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 LCKP06239 509 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 DAOP14920 347 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 ZNF26P17031 533 aaPredicted RBP11.94□□□□□ -0.5
VARS-225ENST00000482996 MSR1P21757 451 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 USF1P22415 310 aaPredicted RBP11.94□□□□□ -0.5
VARS-225ENST00000482996 CCNOP22674 350 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 STOMP27105 288 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 SDHAP31040 664 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 GDI2P50395 445 aaKnown RBP11.94□□□□□ -0.5
VARS-225ENST00000482996 RPS6KA3P51812 740 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 LCN6P62502 163 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 MSMPQ1L6U9 139 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 TMEM249Q2WGJ8 235 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 DNAL1Q4LDG9 190 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 MESTQ5EB52 335 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 SMARCD3Q6STE5 483 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 UNQ6126/PRO20091Q6UXV3 157 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 DPY19L2P2Q6ZN68 376 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 FOXL2NBQ6ZUU3 175 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 FAM122BQ7Z309 247 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 ADCK1Q86TW2 530 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 ZDHHC21Q8IVQ6 265 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 ZCCHC24Q8N2G6 241 aaKnown RBP11.94□□□□□ -0.5
VARS-225ENST00000482996 PAQR4Q8N4S7 273 aaPredicted RBP11.94□□□□□ -0.5
VARS-225ENST00000482996 C11orf40Q8WZ69 217 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 RASD2Q96D21 266 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 FUZQ9BT04 418 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 OR51B6Q9H340 312 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 NRIP3Q9NQ35 241 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 EIF3KQ9UBQ5 218 aaKnown RBP11.94□□□□□ -0.5
VARS-225ENST00000482996 TIMM10BQ9Y5J6 103 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 IER3IP1Q9Y5U9 82 aa11.94□□□□□ -0.5
VARS-225ENST00000482996 GYG2O15488 501 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 RRM2P31350 389 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 ALDH3B1P43353 468 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 NR4A2P43354 598 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 UCP2P55851 309 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 KLF3P57682 345 aaPredicted RBP11.93□□□□□ -0.5
VARS-225ENST00000482996 PSG4Q00888 419 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 GGTLC2Q14390 218 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 NKPD1Q17RQ9 610 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 THSD4Q6ZMP0 1018 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 ZER1Q7Z7L7 766 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 SYT9Q86SS6 491 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 LRP11Q86VZ4 500 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 ICA1LQ8NDH6 482 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 CPEB3Q8NE35 698 aaKnown RBP11.93□□□□□ -0.5
VARS-225ENST00000482996 AKR7LQ8NHP1 331 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 SYNPRQ8TBG9 265 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 FANK1Q8TC84 345 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 UBASH3BQ8TF42 649 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 POP5Q969H6 163 aaKnown RBP11.93□□□□□ -0.5
VARS-225ENST00000482996 FOXN4Q96NZ1 517 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 RAB3IPQ96QF0 476 aaPredicted RBP11.93□□□□□ -0.5
VARS-225ENST00000482996 WACQ9BTA9 647 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 OR2H1Q9GZK4 316 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 TPK1Q9H3S4 243 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms