RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 JSRP1Q96MG2 331 aaPredicted RBP12.96□□□□□ -0.34
CHD3-211ENST00000481999 C5orf34Q96MH7 638 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 AKAP7Q9P0M2 348 aaPredicted RBP12.96□□□□□ -0.34
CHD3-211ENST00000481999 ZNF222Q9UK12 451 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 ZNF292O60281 2723 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 MED13Q9UHV7 2174 aa12.96□□□□□ -0.34
CHD3-211ENST00000481999 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 IFITM5A6NNB3 132 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
CHD3-211ENST00000481999 MS4A18H0YCH9 400 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 AIPO00170 330 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 RAMP1O60894 148 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
CHD3-211ENST00000481999 GP1BAP07359 652 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 H2AFB2P0C5Z0 115 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 POU3F1Q03052 451 aaPredicted RBP12.95□□□□□ -0.34
CHD3-211ENST00000481999 Q0VFX4 171 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 MS4A18Q3C1V0 323 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 DCAF12Q5T6F0 453 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 DHRS13Q6UX07 377 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 LUZP2Q86TE4 346 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 DERL3Q96Q80 235 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 MRM2Q9UI43 246 aaKnown RBP12.95□□□□□ -0.34
CHD3-211ENST00000481999 MRPS18BQ9Y676 258 aaKnown RBP12.95□□□□□ -0.34
CHD3-211ENST00000481999 ACOD1A6NK06 481 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 XKRYO14609 159 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 PIN1P1O15428 100 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 DOK2O60496 412 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 RAD1O60671 282 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 ZFPL1O95159 310 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 TXNDC12O95881 172 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 APEHP13798 732 aaKnown RBP12.95□□□□□ -0.34
CHD3-211ENST00000481999 IFNGR1P15260 489 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 CCR6P51684 374 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 SLC25A1P53007 311 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 KCTD20Q7Z5Y7 419 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 CMTM4Q8IZR5 234 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 C7orf57Q8NEG2 295 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 OR56B4Q8NH76 319 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 THEM6Q8WUY1 208 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 TMEM234Q8WY98 164 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 PPP1R14AQ96A00 147 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 MGAQ8IWI9 3026 aa12.95□□□□□ -0.34
CHD3-211ENST00000481999 NSG1A0A0A6YYJ2 146 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 A0A0G2JMM0 328 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 A0A1W2PPB8 328 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 A0A1W2PRS3 328 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 PRSS37A4D1T9 235 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 KIR3DP1A8MWS1 328 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 C9orf172C9J069 976 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 OR6A2O95222 327 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 MT-ND4P03905 459 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 TACSTD2P09758 323 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 GDNFP39905 211 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 FOLR3P41439 243 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 ZNF41P51814 821 aaPredicted RBP12.94□□□□□ -0.34
CHD3-211ENST00000481999 RPL27P61353 136 aaKnown RBP12.94□□□□□ -0.34
CHD3-211ENST00000481999 SPEM2Q0P670 501 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 MYBPHQ13203 477 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 GSG1Q2KHT4 349 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 ZNF684Q5T5D7 378 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 LIPNQ5VXI9 398 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 NUP54Q7Z3B4 507 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 BPHLQ86WA6 291 aaPredicted RBP12.94□□□□□ -0.34
CHD3-211ENST00000481999 NAXDQ8IW45 347 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 ZNF519Q8TB69 540 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 SLC22A8Q8TCC7 542 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 ZNF431Q8TF32 576 aaPredicted RBP12.94□□□□□ -0.34
CHD3-211ENST00000481999 RNF138Q8WVD3 245 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 RGP1Q92546 391 aaPredicted RBP12.94□□□□□ -0.34
CHD3-211ENST00000481999 NXPE2Q96DL1 559 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 MRI1Q9BV20 369 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 PLEKHA1Q9HB21 404 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 SLCO1C1Q9NYB5 712 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 IKZF2Q9UKS7 526 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 MOKQ9UQ07 419 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 MT-ATP6P00846 226 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 PUDPQ08623 228 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 EEF1A1P5Q5VTE0 462 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 PRSS45Q7RTY3 260 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 FAM220AQ7Z4H9 259 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 FGD2Q7Z6J4 655 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 MISPQ8IVT2 679 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 OR10AC1Q8NH08 325 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 CT55Q8WUE5 264 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 TTC9Q92623 222 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 ADAD1Q96M93 576 aaKnown RBP12.94□□□□□ -0.34
CHD3-211ENST00000481999 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 SLC25A18Q9H1K4 315 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 ZFP64Q9NPA5 681 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 MRPL22Q9NWU5 206 aaKnown RBP12.94□□□□□ -0.34
CHD3-211ENST00000481999 EMC3Q9P0I2 261 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 NXT1Q9UKK6 140 aaKnown RBP12.94□□□□□ -0.34
CHD3-211ENST00000481999 MGAT4AQ9UM21 535 aa12.94□□□□□ -0.34
CHD3-211ENST00000481999 FAM186AA6NE01 2351 aa12.93□□□□□ -0.34
CHD3-211ENST00000481999 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
CHD3-211ENST00000481999 A0A1B0GVI7 797 aa12.93□□□□□ -0.34
CHD3-211ENST00000481999 RENP00797 406 aa12.93□□□□□ -0.34
CHD3-211ENST00000481999 JMJD7P0C870 316 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms