RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 HECTD2Q5U5R9 776 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 TCEAL6Q6IPX3 200 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 ZNF554Q86TJ5 538 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 ZNF677Q86XU0 584 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 SLC35F2Q8IXU6 374 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 DAW1Q8N136 415 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 OR2L5Q8NG80 312 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 CSPG4P5Q96PW8 444 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 LPAR4Q99677 370 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 UTP23Q9BRU9 249 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 HCAR1Q9BXC0 346 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 C3orf14Q9HBI5 128 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 SLC25A37Q9NYZ2 338 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 KLRF1Q9NZS2 232 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 ATPIF1Q9UII2 106 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 FAF1Q9UNN5 650 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 FLVCR2Q9UPI3 526 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 RCL1Q9Y2P8 373 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 MRPS28Q9Y2Q9 187 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 YARS2Q9Y2Z4 477 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 TBL2Q9Y4P3 447 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 UNC79Q9P2D8 2635 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 EPG5Q9HCE0 2579 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 TRBV5-4A0A0C4DH59 114 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 A0A1W2PNV4 684 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 A0A1W2PR80 420 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 ARL5CA6NH57 179 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 CCSO14618 274 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 PRKNO60260 465 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 CTSVO60911 334 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 WT1P19544 449 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 SAA4P35542 130 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 SERPINB8P50452 374 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 PPIDQ08752 370 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 GTF2H2Q13888 395 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 ZNF658Q5TYW1 1059 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 GTF2H2CQ6P1K8 395 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 TPGS1Q6ZTW0 290 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 CCDC71Q8IV32 467 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 FUNDC1Q8IVP5 155 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 Q8N9G6 341 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 DMBX1Q8NFW5 382 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 OR10A7Q8NGE5 316 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 OR51F2Q8NH61 342 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 DYRK2Q92630 601 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 SARAFQ96BY9 339 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 CELF6Q96J87 481 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 IL17FQ96PD4 163 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 NLE1Q9NVX2 485 aaPredicted RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 ABCD2Q9UBJ2 740 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 WIPI2Q9Y4P8 454 aa2.75□□□□□ -1.97
SMC6-208ENST00000481708 FLNBO75369 2602 aaKnown RBP2.75□□□□□ -1.97
SMC6-208ENST00000481708 LOC400499M0QZD8 3231 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TSPAN11A1L157 253 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TUBAL3A6NHL2 446 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 PSTPIP1O43586 416 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 KIAA0513O60268 411 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 CCNB2O95067 398 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 GSTA2P09210 222 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 EFNA1P20827 205 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 PRLHRP49683 370 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 DCDC1P59894 354 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TSPAN5P62079 268 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TMEM187Q14656 261 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 LAGE3Q14657 143 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 P2RY6Q15077 328 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 USF2Q15853 346 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 C1orf94Q6P1W5 598 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 CWC27Q6UX04 472 aaKnown RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 SETD3Q86TU7 594 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 Q8N1X5 172 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TTC29Q8NA56 475 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 ACTL9Q8TC94 416 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 LGALS14Q8TCE9 139 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 OR5P2Q8WZ92 322 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 SERAC1Q96JX3 654 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 OPALINQ96PE5 141 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 RANBP9Q96S59 729 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 FOLH1BQ9HBA9 442 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ELOVL2Q9NXB9 296 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 CFL2Q9Y281 166 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 NTNG1Q9Y2I2 539 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ZNF256Q9Y2P7 627 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 TMEM210A6NLX4 147 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TPST2O60704 377 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 RPSAP08865 295 aaKnown RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 MYL2P10916 166 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 GATA1P15976 413 aaPredicted RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 IMPDH1P20839 514 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 GTF2H1P32780 548 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 SLC26A3P40879 764 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 PLK1P53350 603 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 PRPS1P60891 318 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 BASP1P80723 227 aaKnown RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 GPR17Q13304 367 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ZSCAN26Q16670 478 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 TRMT5Q32P41 509 aaKnown RBP2.74□□□□□ -1.97
SMC6-208ENST00000481708 ZNF549Q6P9A3 640 aa2.74□□□□□ -1.97
SMC6-208ENST00000481708 ULK3Q6PHR2 472 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms