RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 NTHL1P78549 312 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 ACOT6Q3I5F7 207 aaPredicted RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 GLYATL3Q5SZD4 288 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 C1orf140Q5VVS0 124 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 TTC9BQ8N6N2 239 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 PAAF1Q9BRP4 392 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 SORBS1Q9BX66 1292 aaKnown RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 ERVMER34-1Q9H9K5 563 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 SHPKQ9UHJ6 478 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 GYPBP06028 91 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 LYPD4Q6UWN0 246 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 ESPNLQ6ZVH7 1005 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 SIAH3Q8IW03 269 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 DNAJC5GQ8N7S2 189 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 SONP18583 2426 aaKnown RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 A0A1B0GWA3 101 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 A0A1B0GX78 115 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 MEIS3P2A8K0S8 358 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 B3GALNT1O75752 331 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 F13BP05160 661 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 CST5P28325 142 aaPredicted RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 EPHA5P54756 1037 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 CTU2Q2VPK5 515 aaKnown RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 MARC2Q969Z3 335 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 CHST11Q9NPF2 352 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 KCNG2Q9UJ96 466 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 RAF1P04049 648 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 MLF2Q15773 248 aaPredicted RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 IAH1Q2TAA2 248 aaPredicted RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 ZNF628Q5EBL2 1059 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 DND1Q8IYX4 353 aaKnown RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 FAM185AQ8N0U4 392 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 HRASLS5Q96KN8 279 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 RANGRFQ9HD47 186 aaPredicted RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 PRSS16Q9NQE7 514 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 OSGIN1Q9UJX0 560 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 MAGEB4O15481 346 aaPredicted RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 PRSS56P0CW18 603 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 ELAVL4P26378 380 aaKnown RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 ELAVL1Q15717 326 aaKnown RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 SIAH1Q8IUQ4 282 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 OR2G3Q8NGZ4 309 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 PSORS1C1Q9UIG5 152 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 MN1Q10571 1320 aaPredicted RBP8.79□□□□□ -1
VEGFA-212ENST00000480614 LRRK1Q38SD2 2015 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 FAM183AA6NL82 134 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 KIAA1024LP59773 190 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 HOXC5Q00444 222 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 ZNF425Q6IV72 752 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 TMEM64Q6YI46 380 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 ZNF687Q8N1G0 1237 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 ANGPTL6Q8NI99 470 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 GOLT1BQ9Y3E0 138 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 CTSCP53634 463 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 BTN1A1Q13410 526 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 ZNF573Q86YE8 665 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 YIPF5Q969M3 257 aa8.79□□□□□ -1
VEGFA-212ENST00000480614 PRSS44E7EML9 344 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 CHEK1O14757 476 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 CASP3P42574 277 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ADIRFQ15847 76 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SYPL1Q16563 259 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 OVCH1Q7RTY7 1134 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 OR10R2Q8NGX6 335 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ZNF586Q9NXT0 402 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 GPR55Q9Y2T6 319 aaPredicted RBP8.78□□□□□ -1
VEGFA-212ENST00000480614 USP3Q9Y6I4 520 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 PTAFRP25105 342 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 RACK1P63244 317 aaKnown RBP8.78□□□□□ -1
VEGFA-212ENST00000480614 ZNF85Q03923 595 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 FAM78AQ5JUQ0 283 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SLC35D2Q76EJ3 337 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 NLRC3Q7RTR2 1065 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 MEX3DQ86XN8 651 aaKnown RBP8.78□□□□□ -1
VEGFA-212ENST00000480614 SEH1LQ96EE3 360 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 TMEM129A0AVI4 362 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ABCD4O14678 606 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 OR2F2O95006 317 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 NDUFB7P17568 137 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 FOXA1P55317 472 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SLC35A2P78381 396 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 OR2F1Q13607 317 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 LTC4SQ16873 150 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 GDF7Q7Z4P5 450 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SYT9Q86SS6 491 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 HSD17B8Q92506 261 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 NUDT22Q9BRQ3 303 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ACTR3CQ9C0K3 210 aaPredicted RBP8.78□□□□□ -1
VEGFA-212ENST00000480614 SSC5DA1L4H1 1573 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 SLC5A10A0PJK1 596 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 PMS2P1A4D2B8 440 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 ACOD1A6NK06 481 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 HSPB6O14558 160 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 PAPLNO95428 1278 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 CYC1P08574 325 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 M6PRP20645 277 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 RANP62826 216 aaKnown RBP8.78□□□□□ -1
VEGFA-212ENST00000480614 OTUD1Q5VV17 481 aaPredicted RBP8.78□□□□□ -1
VEGFA-212ENST00000480614 LMNTD1Q8N9Z9 388 aa8.78□□□□□ -1
VEGFA-212ENST00000480614 H1FXQ92522 213 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms