RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CHIAQ9BZP6 476 aa16.97■□□□□ 0.31
PDLIM1-202ENST00000477757 RNF13O43567 381 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 TPST2O60704 377 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 TNFRSF1AP19438 455 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 GDI2P50395 445 aaKnown RBP16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 CLRN1P58418 232 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 RPL15P61313 204 aaKnown RBP16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 PPP1CBP62140 327 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 HLXQ14774 488 aaPredicted RBP16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 ZNF74Q16587 644 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 C6orf10Q5SRN2 563 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 BRD3OSQ6XYD6 125 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 KRT73Q86Y46 540 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 POU5F2Q8N7G0 328 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 OR10S1Q8NGN2 331 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 ABHD4Q8TB40 342 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 THOC1Q96FV9 657 aaKnown RBP16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 SAMD8Q96LT4 415 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 ZNF347Q96SE7 839 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 RAD21L1Q9H4I0 556 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 NANOGQ9H9S0 305 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 CCNB1IP1Q9NPC3 277 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 NOX4Q9NPH5 578 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 TNFRSF19Q9NS68 423 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 PNPOQ9NVS9 261 aa16.96■□□□□ 0.31
PDLIM1-202ENST00000477757 SLC22A3O75751 556 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 WNT2P09544 360 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 IDO1P14902 403 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 ZNF32P17041 273 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 TNFSF4P23510 183 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 CPT2P23786 658 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 MRPS34P82930 218 aaKnown RBP16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 C10orf128Q5T292 105 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 LINC00114Q6XXX2 140 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 Q6YL49 198 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 RANBP3LQ86VV4 465 aaPredicted RBP16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 NFKBIDQ8NI38 313 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 RAB40AQ8WXH6 277 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 WFDC6Q9BQY6 131 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 MRPL13Q9BYD1 178 aaKnown RBP16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 SIAEQ9HAT2 523 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 SLCO1B3Q9NPD5 702 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 RNF114Q9Y508 228 aa16.95■□□□□ 0.3
PDLIM1-202ENST00000477757 CENPBD1B2RD01 187 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 CLIC1O00299 241 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 TIMM8AO60220 97 aaPredicted RBP16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 CLPXO76031 633 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 EPHA3P29320 983 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 ZNF133P52736 654 aaPredicted RBP16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 HHATQ5VTY9 493 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 ZER1Q7Z7L7 766 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 AKR7LQ8NHP1 331 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 NABP1Q96AH0 204 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 SLC30A2Q9BRI3 323 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 PAIP1Q9H074 479 aaKnown RBP16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 KCNN2Q9H2S1 579 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 WDR55Q9H6Y2 383 aaPredicted RBP16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 NANSQ9NR45 359 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 PPP1R3CQ9UQK1 317 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 POMT1Q9Y6A1 747 aa16.94■□□□□ 0.3
PDLIM1-202ENST00000477757 PRORSD1PA6NEY8 169 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 CHP2O43745 196 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 ERLIN1O75477 346 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 CH25HO95992 272 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 RPS2P15880 293 aaKnown RBP16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 HOXB9P17482 250 aaPredicted RBP16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 PROK1P58294 105 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 BPIFB3P59826 476 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 REEP3Q6NUK4 255 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 ZNF613Q6PF04 617 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 EVA1AQ9H8M9 152 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 ASH2LQ9UBL3 628 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 ZNF229Q9UJW7 825 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 UGT2A1Q9Y4X1 527 aa16.93■□□□□ 0.3
PDLIM1-202ENST00000477757 TMEM178BH3BS89 294 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 FMO6PO60774 539 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 MELTFP08582 738 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 BGNP21810 368 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 CDAP32320 146 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 MMP16P51512 607 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 PSG4Q00888 419 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 IFFO1Q0D2I5 559 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 PSG7Q13046 419 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 GCNT6Q5T4J0 391 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 GPR157Q5UAW9 335 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 ZNF620Q6ZNG0 422 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 KLBQ86Z14 1044 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 OR2Z1Q8NG97 314 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 LINC01006Q8NI28 216 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 ITLN1Q8WWA0 313 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 GTF2H4Q92759 462 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 SDR39U1Q9NRG7 319 aaPredicted RBP16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 ZIM2Q9NZV7 527 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 SLC13A4Q9UKG4 626 aa16.92■□□□□ 0.3
PDLIM1-202ENST00000477757 KIR2DS1A0A191URI9 304 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 PIN1P1O15428 100 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 ASAH2BP0C7U1 165 aa16.91■□□□□ 0.3
PDLIM1-202ENST00000477757 GNB2P62879 340 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms