RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 GINS1Q14691 196 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 SLC22A25Q6T423 547 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 TUBA1AQ71U36 451 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 ZBTB46Q86UZ6 589 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 SDR9C7Q8NEX9 313 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 RERGLQ9H628 205 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 PLEKHF2Q9H8W4 249 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 RNF121Q9H920 327 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 SLC25A19Q9HC21 320 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 SRA1Q9HD15 236 aaKnown RBP11.43□□□□□ -0.58
TOP3A-205ENST00000477508 CCNB1IP1Q9NPC3 277 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 RPRD1BQ9NQG5 326 aaKnown RBP11.43□□□□□ -0.58
TOP3A-205ENST00000477508 POLE4Q9NR33 117 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF224Q9NZL3 707 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 B9D1Q9UPM9 204 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 ORC6Q9Y5N6 252 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 IGLV1-36A0A0B4J1U3 117 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 IQCMA0A1B0GVH7 501 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 SAC3D1A6NKF1 404 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 SERPINA5P05154 406 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 CECR9P0C854 216 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 IGFBP5P24593 272 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 IDH3GP51553 393 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-205ENST00000477508 PPP2R2BQ00005 443 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 KCNMB1Q16558 191 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF362Q5T0B9 420 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-205ENST00000477508 C20orf204Q6ZNR8 217 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 ALDH16A1Q8IZ83 802 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 OR6V1Q8N148 313 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 LRRC18Q8N456 261 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 SLC37A3Q8NCC5 494 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 OR4F15Q8NGB8 312 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 OR1J2Q8NGS2 313 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 PLEKHA8Q96JA3 519 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 DDOQ99489 341 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 C9orf16Q9BUW7 83 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 POU2F3Q9UKI9 436 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 COA3Q9Y2R0 106 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-205ENST00000477508 TIMM10BQ9Y5J6 103 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 FBN2P35556 2912 aa11.42□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF503-AS2A6NEH8 195 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 ERICH4A6NGS2 130 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 VSTM5A8MXK1 200 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 HS3ST1O14792 307 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 BAG2O95816 211 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 MMP7P09237 267 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF14P17017 642 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-205ENST00000477508 RAD23AP54725 363 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 KRTAP10-9P60411 292 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 NAAAQ02083 359 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 HSF2Q03933 536 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 SCRN3Q0VDG4 424 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 NPRL3Q12980 569 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 DAG1Q14118 895 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 CRMP1Q14194 572 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 PTGES3Q15185 160 aaKnown RBP11.41□□□□□ -0.58
TOP3A-205ENST00000477508 ETFDHQ16134 617 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF672Q499Z4 452 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-205ENST00000477508 ACSM5Q6NUN0 579 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF611Q8N823 705 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 AKAP1Q92667 903 aaKnown RBP eCLIP11.41□□□□□ -0.58
TOP3A-205ENST00000477508 TSSK2Q96PF2 358 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 CIB1Q99828 191 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 FAIMQ9NVQ4 179 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 USE1Q9NZ43 259 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 TMEFF2Q9UIK5 374 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-205ENST00000477508 KCNG2Q9UJ96 466 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 SPEF1Q9Y4P9 236 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 AKAP6Q13023 2319 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 PLCE1Q9P212 2302 aa11.41□□□□□ -0.58
TOP3A-205ENST00000477508 A0A1W2PPR1 153 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 SHISA9B4DS77 424 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 DCTN6O00399 190 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 SURF4O15260 269 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 TMCC2O75069 709 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 PLAUP00749 431 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 ALPLP05186 524 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 PATE4P0C8F1 98 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF32P17041 273 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 ALDH3A2P51648 485 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 CDH11P55287 796 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 AQP6Q13520 282 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 ENDOGQ14249 297 aaKnown RBP11.4□□□□□ -0.58
TOP3A-205ENST00000477508 DMRTA1Q5VZB9 504 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 IQCF1Q8N6M8 205 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 CYB561A3Q8NBI2 242 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 PROKR2Q8NFJ6 384 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 KBTBD8Q8NFY9 601 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 SLC26A10Q8NG04 563 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 OR10H5Q8NGA6 315 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 FGFBP3Q8TAT2 258 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 C11orf40Q8WZ69 217 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 NINJ1Q92982 152 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 FBXW5Q969U6 566 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 EME1Q96AY2 570 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 FBXO17Q96EF6 278 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF75AQ96N20 296 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF416Q9BWM5 594 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 NMNAT2Q9BZQ4 307 aa11.4□□□□□ -0.58
TOP3A-205ENST00000477508 FN3KQ9H479 309 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms