RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ZNF770Q6IQ21 691 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 XKRXQ6PP77 449 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SCIMPQ6UWF3 145 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TMEM107Q6UX40 140 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ZNF836Q6ZNA1 936 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TMEM179Q6ZVK1 233 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 Q7L0L9 218 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SLC16A13Q7RTY0 426 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 GRINAQ7Z429 371 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 FAM220AQ7Z4H9 259 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 GPBP1Q86WP2 473 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 RIMKLAQ8IXN7 391 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 KLHDC8AQ8IYD2 350 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ZNF683Q8IZ20 524 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CMTM8Q8IZV2 173 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 PGAM4Q8N0Y7 254 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SLC39A11Q8N1S5 342 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SYS1Q8N2H4 156 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 Q8N377 158 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CADM2Q8N3J6 435 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 STPG2Q8N412 459 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CSNK1A1LQ8N752 337 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 C8orf31Q8N9H6 132 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CDRT4Q8N9R6 151 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 HJURPQ8NCD3 748 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 OR7G2Q8NG99 324 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 OR1M1Q8NGA1 313 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 OR13D1Q8NGV5 346 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 M1APQ8TC57 530 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 MRAPQ8TCY5 172 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CD200R1Q8TD46 325 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ABHD3Q8WU67 409 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 UBTD2Q8WUN7 234 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TMEM239Q8WW34 195 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 APH1BQ8WW43 257 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ACOT11Q8WXI4 607 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 RAD54LQ92698 747 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 NAT6Q93015 286 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 LHX4Q969G2 390 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.12□□□□□ -2.07
XRN1-211ENST00000477237 NTNG2Q96CW9 530 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 MMABQ96EY8 250 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 ZBED6CLQ96FA7 236 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 ELMOD3Q96FG2 381 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SH3YL1Q96HL8 342 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 RNF170Q96K19 258 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ALKBH3Q96Q83 286 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 TSNAXQ99598 290 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 SDHCQ99643 169 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 NAPGQ99747 312 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 AIF1LQ9BQI0 150 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CCDC3Q9BQI4 270 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 LMF2Q9BU23 707 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 NDUFAF3Q9BU61 184 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CLEC7AQ9BXN2 247 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SLC2A11Q9BYW1 496 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ILKAPQ9H0C8 392 aaPredicted RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 SHARPINQ9H0F6 387 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ING2Q9H160 280 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 NEUROG2Q9H2A3 272 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 BOLA2Q9H3K6 86 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 PLK3Q9H4B4 646 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ANKRD19PQ9H560 264 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 POPDC2Q9HBU9 364 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 EML4Q9HC35 981 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 Q9N2K0 584 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 TMEM138Q9NPI0 162 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 RRP7BPQ9NSQ0 103 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 FGFR1OP2Q9NVK5 253 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SMOXQ9NWM0 555 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 NPAP1Q9NZP6 1156 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 BFARQ9NZS9 450 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ABI3Q9P2A4 366 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 DHCR7Q9UBM7 475 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 IL17BQ9UHF5 180 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ZDHHC2Q9UIJ5 367 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 MRTO4Q9UKD2 239 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 RNF150Q9ULK6 438 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 GPR132Q9UNW8 380 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 EXO1Q9UQ84 846 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 GSTK1Q9Y2Q3 226 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 OR10H1Q9Y4A9 318 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 YIPF1Q9Y548 306 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ARL5AQ9Y689 179 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 HSPE1-MOB4S4R3N1 261 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 DICER1Q9UPY3 1922 aaKnown RBP2.12□□□□□ -2.07
XRN1-211ENST00000477237 LAMC1P11047 1609 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 SNAPC4Q5SXM2 1469 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ABCC10Q5T3U5 1492 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 CCDC18Q5T9S5 1454 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 ARHGAP23Q9P227 1491 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 MYH11P35749 1972 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 KDM5DQ9BY66 1539 aa2.12□□□□□ -2.07
XRN1-211ENST00000477237 FLT4P35916 1363 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 HEG1Q9ULI3 1381 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 BCORL1Q5H9F3 1711 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 NALCNQ8IZF0 1738 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SYNMO15061 1565 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PPIAL4EA0A075B759 164 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms