RNA–Protein interactions for RNA: ENST00000477100.1

TRBVB-201, Transcript of T cell receptor beta variable B (pseudogene), humanhuman

BASIC

Gene TRBVB, Length 408 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVB-201ENST00000477100 DEFB104AQ8WTQ1 72 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 ST8SIA1Q92185 356 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 DNAJC19Q96DA6 116 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 SLC30A2Q9BRI3 323 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 TMEM246Q9BRR3 403 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 NAT10Q9H0A0 1025 aaKnown RBP0.23□□□□□ -2.37
TRBVB-201ENST00000477100 HOMER3Q9NSC5 361 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 TRAF3IP3Q9Y228 551 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 AMMECR1Q9Y4X0 333 aaPredicted RBP0.23□□□□□ -2.37
TRBVB-201ENST00000477100 OARD1Q9Y530 152 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 BCORQ6W2J9 1755 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 DNAH9Q9NYC9 4486 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 ZFC3H1O60293 1989 aaKnown RBP0.23□□□□□ -2.37
TRBVB-201ENST00000477100 PTPRBP23467 1997 aa0.23□□□□□ -2.37
TRBVB-201ENST00000477100 TNRC6AQ8NDV7 1962 aaKnown RBP0.23□□□□□ -2.37
TRBVB-201ENST00000477100 CCDC141Q6ZP82 1450 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 ATAD5Q96QE3 1844 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 NFASCO94856 1347 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 IGHV3OR16-8A0A075B7F1 116 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 TRIM64A6NGJ6 449 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 TRIM64BA6NI03 449 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 HIDE1A8MVS5 230 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 PRKYO43930 277 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 TBX19O60806 448 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 UGT2B17O75795 530 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 CXCL14O95715 111 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 HPGDP15428 266 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 CNR1P21554 472 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 DPP4P27487 766 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 SHMT2P34897 504 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 BTCP35070 178 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 BDKRB1P46663 353 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 GYG1P46976 350 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 CX3CR1P49238 355 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 NUMBP49757 651 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 PRKXP51817 358 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 CCL23P55773 120 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 STARD6P59095 220 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 KRTAP10-4P60372 401 aaPredicted RBP0.22□□□□□ -2.37
TRBVB-201ENST00000477100 MYBPC1Q00872 1141 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 GFPT1Q06210 699 aaPredicted RBP0.22□□□□□ -2.37
TRBVB-201ENST00000477100 RAB40BQ12829 278 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 CUL1Q13616 776 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 PHYHD1Q5SRE7 291 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 GPRC6AQ5T6X5 926 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 TIGD3Q6B0B8 471 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 APOBEC3HQ6NTF7 200 aaKnown RBP0.22□□□□□ -2.37
TRBVB-201ENST00000477100 MIER3Q7Z3K6 550 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 ZNF571Q7Z3V5 609 aaPredicted RBP0.22□□□□□ -2.37
TRBVB-201ENST00000477100 OR10G4Q8NGN3 311 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 FIBINQ8TAL6 211 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 RSPH1Q8WYR4 309 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 ISOC1Q96CN7 298 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 DUS3LQ96G46 650 aaKnown RBP0.22□□□□□ -2.37
TRBVB-201ENST00000477100 SHANK2-AS3Q9BTD1 123 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 NAT9Q9BTE0 207 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 FTHL17Q9BXU8 183 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 DUSP16Q9BY84 665 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 QPCTLQ9NXS2 382 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 MRPL39Q9NYK5 338 aaKnown RBP0.22□□□□□ -2.37
TRBVB-201ENST00000477100 POLEQ07864 2286 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 ASCC3Q8N3C0 2202 aaKnown RBP0.22□□□□□ -2.37
TRBVB-201ENST00000477100 PKHD1L1Q86WI1 4243 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 ALPK2Q86TB3 2170 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 TAF1LQ8IZX4 1826 aa0.22□□□□□ -2.37
TRBVB-201ENST00000477100 CPSF1Q10570 1443 aaKnown RBP0.21□□□□□ -2.38
TRBVB-201ENST00000477100 KANK1Q14678 1352 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 CCDC7Q96M83 1385 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 PIK3R4Q99570 1358 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 PLECQ15149 4684 aaKnown RBP0.21□□□□□ -2.38
TRBVB-201ENST00000477100 USF3Q68DE3 2245 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 LRRC30A6NM36 301 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 ANKRD30BLA7E2S9 258 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 C9J4A7 227 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 E7ESA3 106 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 ADAM12O43184 909 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 FIBPO43427 364 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 BGLAPP02818 100 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 H2BFMP0C1H6 154 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 UBTFL1P0CB47 393 aaPredicted RBP0.21□□□□□ -2.38
TRBVB-201ENST00000477100 TPSB2P20231 275 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 CYP2B6P20813 491 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 MUTP22033 750 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 TCF7P36402 384 aaPredicted RBP0.21□□□□□ -2.38
TRBVB-201ENST00000477100 PRRX1P54821 245 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 NME5P56597 212 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 TNFRSF17Q02223 184 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 YWHAHQ04917 246 aaPredicted RBP0.21□□□□□ -2.38
TRBVB-201ENST00000477100 PPP1R8Q12972 351 aaKnown RBP0.21□□□□□ -2.38
TRBVB-201ENST00000477100 TPSAB1Q15661 275 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 FAM159AQ6UWV7 190 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 Q6ZRN7 208 aaPredicted RBP0.21□□□□□ -2.38
TRBVB-201ENST00000477100 FAM47EQ6ZV65 393 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 APTXQ7Z2E3 356 aaKnown RBP0.21□□□□□ -2.38
TRBVB-201ENST00000477100 DEFB128Q7Z7B8 93 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 LPCAT1Q8NF37 534 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 ANKRD20A12PQ8NF67 263 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 TCTEX1D2Q8WW35 142 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 SHC3Q92529 594 aa0.21□□□□□ -2.38
TRBVB-201ENST00000477100 OPTNQ96CV9 577 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms