RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 TMEM129A0AVI4 362 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 SMPD2O60906 423 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 IGHV4-39P01824 125 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 SLC6A6P31641 620 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 PSG4Q00888 419 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 C3orf36Q3SXR2 165 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 PABPC1L2AQ5JQF8 200 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 Q5PR19 223 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 C1orf146Q5VVC0 180 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 FAM205BPQ63HN1 556 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 SPNS3Q6ZMD2 512 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 RASSF6Q6ZTQ3 369 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 AMIGO2Q86SJ2 522 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 OR6V1Q8N148 313 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 ZCCHC24Q8N2G6 241 aaKnown RBP10.74□□□□□ -0.69
APTX-220ENST00000476858 NPEPL1Q8NDH3 523 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 GIPC3Q8TF64 312 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 TMEM171Q8WVE6 324 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 RBP7Q96R05 134 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 DGCR6LQ9BY27 220 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 RNF121Q9H920 327 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 SIAEQ9HAT2 523 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 SRA1Q9HD15 236 aaKnown RBP10.74□□□□□ -0.69
APTX-220ENST00000476858 CA10Q9NS85 328 aa10.74□□□□□ -0.69
APTX-220ENST00000476858 ZNF701Q9NV72 531 aaPredicted RBP10.74□□□□□ -0.69
APTX-220ENST00000476858 PDP1Q9P0J1 537 aaPredicted RBP10.74□□□□□ -0.69
APTX-220ENST00000476858 MYEF2Q9P2K5 600 aaKnown RBP10.74□□□□□ -0.69
APTX-220ENST00000476858 TEP1Q99973 2627 aaKnown RBP10.73□□□□□ -0.69
APTX-220ENST00000476858 HEATR1Q9H583 2144 aaKnown RBP10.73□□□□□ -0.69
APTX-220ENST00000476858 TRIM64A6NGJ6 449 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 TRIM64BA6NI03 449 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 XKRYO14609 159 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 ARPC3O15145 178 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 ATP5HO75947 161 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 UBL3O95164 117 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 RAB36O95755 333 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 CRYAAP02489 173 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 TFP02787 698 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 SERPINA5P05154 406 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 OR4A8P0C604 315 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 FAM157BP0CG42 384 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 GAAP10253 952 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 CLUP10909 449 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 ANOS1P23352 680 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 NOS3P29474 1203 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 PYCR1P32322 319 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 WNT5AP41221 380 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 RPS6KA3P51812 740 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.73□□□□□ -0.69
APTX-220ENST00000476858 SNTB2Q13425 540 aaKnown RBP10.73□□□□□ -0.69
APTX-220ENST00000476858 SWI5Q1ZZU3 235 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 SLC36A3Q495N2 470 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 FAM27BQ5VT28 67 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 GPR139Q6DWJ6 353 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 ZNF774Q6NX45 483 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 CCDC121Q6ZUS5 278 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 SSX8Q7RTT4 187 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 HDDC2Q7Z4H3 204 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 MUC15Q8N387 334 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 OR52E2Q8NGJ4 325 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 OR9Q1Q8NGQ5 310 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 LRTOMTQ8WZ04 291 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 C11orf40Q8WZ69 217 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 SLC7A6Q92536 515 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 PIGTQ969N2 578 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 TSSK6Q9BXA6 273 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 HCAR1Q9BXC0 346 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 CACNG6Q9BXT2 260 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 OR2H1Q9GZK4 316 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 MED20Q9H944 212 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 KRCC1Q9NPI7 259 aaPredicted RBP10.73□□□□□ -0.69
APTX-220ENST00000476858 RPRD1BQ9NQG5 326 aaKnown RBP10.73□□□□□ -0.69
APTX-220ENST00000476858 TBC1D23Q9NUY8 699 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 IL20Q9NYY1 176 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 B9D1Q9UPM9 204 aa10.73□□□□□ -0.69
APTX-220ENST00000476858 MITFO75030 526 aaPredicted RBP10.72□□□□□ -0.69
APTX-220ENST00000476858 STAMBPO95630 424 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 GYPBP06028 91 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 APEHP13798 732 aaKnown RBP10.72□□□□□ -0.69
APTX-220ENST00000476858 NR4A1P22736 598 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 IFNGR2P38484 337 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 RPS27P42677 84 aaKnown RBP10.72□□□□□ -0.69
APTX-220ENST00000476858 HNRNPA0Q13151 305 aaKnown RBP10.72□□□□□ -0.69
APTX-220ENST00000476858 KPNB1Q14974 876 aaKnown RBP10.72□□□□□ -0.69
APTX-220ENST00000476858 TMEM236Q5W0B7 351 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 ACSM5Q6NUN0 579 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 CORO6Q6QEF8 472 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 YTHDF3Q7Z739 585 aaKnown RBP10.72□□□□□ -0.69
APTX-220ENST00000476858 CCDC36Q8IYA8 594 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 SVOPLQ8N434 492 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 SLC37A3Q8NCC5 494 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 SLC30A7Q8NEW0 376 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 OR51L1Q8NGJ5 315 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 GTF3AQ92664 365 aaKnown RBP10.72□□□□□ -0.69
APTX-220ENST00000476858 Q96MF0 132 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 SMR3AQ99954 134 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 GSX2Q9BZM3 304 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 POFUT1Q9H488 388 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 CBLN4Q9NTU7 201 aa10.72□□□□□ -0.69
APTX-220ENST00000476858 MRPL22Q9NWU5 206 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms