RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 LINC00114Q6XXX2 140 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 BRD3OSQ6XYD6 125 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 Q6YL49 198 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 RFPL4BQ6ZWI9 263 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 C1orf174Q8IYL3 243 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 KIRREL3Q8IZU9 778 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 POU5F2Q8N7G0 328 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 HIPK4Q8NE63 616 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 OR10S1Q8NGN2 331 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 ABHD4Q8TB40 342 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 ITCHQ96J02 903 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 SAMD8Q96LT4 415 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF347Q96SE7 839 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 SEPHS2Q99611 448 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 MRPL13Q9BYD1 178 aaKnown RBP9.52□□□□□ -0.89
BRCA1-213ENST00000476777 MARCH7Q9H992 704 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 SIAEQ9HAT2 523 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 COL7A1Q02388 2944 aa9.52□□□□□ -0.89
BRCA1-213ENST00000476777 H3BSA7 217 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 BIRC5O15392 142 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 PLXNB1O43157 2135 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 RNF13O43567 381 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 MGRN1O60291 552 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 ICMTO60725 284 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 CLPXO76031 633 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 CH25HO95992 272 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF32P17041 273 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 EPHA3P29320 983 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF84P51523 738 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 RGS8P57771 180 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-213ENST00000476777 CLRN1P58418 232 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 PPP1CBP62140 327 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 PDCD1Q15116 288 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 C6orf10Q5SRN2 563 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 CEP85LQ5SZL2 805 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 MSANTD1Q6ZTZ1 278 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 TMEM86BQ8N661 226 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 AKR7LQ8NHP1 331 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 NFKBIDQ8NI38 313 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 RAB40AQ8WXH6 277 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 SSBP3Q9BWW4 388 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-213ENST00000476777 SLC19A3Q9BZV2 496 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 WDR55Q9H6Y2 383 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-213ENST00000476777 RMND5AQ9H871 391 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 NANOGQ9H9S0 305 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 CCNB1IP1Q9NPC3 277 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 NOX4Q9NPH5 578 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 RNF114Q9Y508 228 aa9.51□□□□□ -0.89
BRCA1-213ENST00000476777 KIR2DS1A0A191URI9 304 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 CLIC1O00299 241 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 TIMM8AO60220 97 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 THRBP10828 461 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 IDO1P14902 403 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 HOXB9P17482 250 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 TNFRSF1AP19438 455 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 BGNP21810 368 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 CPT2P23786 658 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 CDAP32320 146 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 GDI2P50395 445 aaKnown RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF133P52736 654 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 PROK1P58294 105 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 MRPS34P82930 218 aaKnown RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 PSG4Q00888 419 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 PSG7Q13046 419 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 C10orf128Q5T292 105 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 HHATQ5VTY9 493 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 REEP3Q6NUK4 255 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 Q6ZR03 302 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 KRT73Q86Y46 540 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 MUC20Q8N307 709 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 NOXO1Q8NFA2 376 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 LINC01006Q8NI28 216 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 FAM110DQ8TAY7 271 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 GTF2H4Q92759 462 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 NABP1Q96AH0 204 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 THOC1Q96FV9 657 aaKnown RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 SLC30A2Q9BRI3 323 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 SPATA5L1Q9BVQ7 753 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 PAIP1Q9H074 479 aaKnown RBP9.5□□□□□ -0.89
BRCA1-213ENST00000476777 KCNN2Q9H2S1 579 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 RAD21L1Q9H4I0 556 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 SLCO1B3Q9NPD5 702 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 NANSQ9NR45 359 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 PPP1R3CQ9UQK1 317 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 UGT2A1Q9Y4X1 527 aa9.5□□□□□ -0.89
BRCA1-213ENST00000476777 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 CENPBD1B2RD01 187 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 TMEM178BH3BS89 294 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 LYPD3O95274 346 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 SLC2A10O95528 541 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 MELTFP08582 738 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ASAH2BP0C7U1 165 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 TNFSF4P23510 183 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 BPIFB3P59826 476 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 RPL15P61313 204 aaKnown RBP9.49□□□□□ -0.89
BRCA1-213ENST00000476777 CDK6Q00534 326 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 GCNT6Q5T4J0 391 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF613Q6PF04 617 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 ZNF620Q6ZNG0 422 aa9.49□□□□□ -0.89
BRCA1-213ENST00000476777 Q6ZPA2 131 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms