RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TBC1D24Q9ULP9 559 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 TTC41PQ6P2S7 1318 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 CAMTA1Q9Y6Y1 1673 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 DENND4AQ7Z401 1863 aa3.83□□□□□ -1.8
VPS50-212ENST00000476413 HUS1O60921 280 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 SERPINE2P07093 398 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 MYL2P10916 166 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 CCNB1P14635 433 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 NAMPTP43490 491 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 UQCRFS1P47985 274 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 CSNK1EP49674 416 aaKnown RBP3.82□□□□□ -1.8
VPS50-212ENST00000476413 MADCAM1Q13477 382 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 IL18Q14116 193 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 ANKRD22Q5VYY1 191 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 TEX43Q6ZNM6 134 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 ZNF493Q6ZR52 646 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 STRADAQ7RTN6 431 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 ZFP41Q8N8Y5 198 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 BPIFCQ8NFQ6 507 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 OR10J6PQ8NGY7 276 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 FAM3DQ96BQ1 224 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 ZNF799Q96GE5 643 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 TAAR1Q96RJ0 339 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 TEKT3Q9BXF9 490 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 MRPS30Q9NP92 439 aaKnown RBP3.82□□□□□ -1.8
VPS50-212ENST00000476413 KCNJ16Q9NPI9 418 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 ZNF629Q9UEG4 869 aaPredicted RBP3.82□□□□□ -1.8
VPS50-212ENST00000476413 PSG8Q9UQ74 426 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 WSB1Q9Y6I7 421 aa3.82□□□□□ -1.8
VPS50-212ENST00000476413 TRAV25A0A0B4J276 109 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 IGKV6D-41A0A0C4DH26 115 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 CIB4A0PJX0 185 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 H0YIV9 168 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 CASQ2O14958 399 aaPredicted RBP3.81□□□□□ -1.8
VPS50-212ENST00000476413 SCAMP2O15127 329 aaKnown RBP3.81□□□□□ -1.8
VPS50-212ENST00000476413 CLDN11O75508 207 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 MGMTP16455 207 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 MAS1LP35410 378 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 MRPL19P49406 292 aaKnown RBP3.81□□□□□ -1.8
VPS50-212ENST00000476413 RND2P52198 227 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 TWF1Q12792 350 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 ZSCAN26Q16670 478 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 SLC34A3Q8N130 599 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 OR4S2Q8NH73 311 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 LYPD6BQ8NI32 183 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 LKAAEAR1Q8TD35 194 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 COL21A1Q96P44 957 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 NCOR1P1Q9H4R4 102 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 RETNQ9HD89 108 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 C20orf96Q9NUD7 363 aaPredicted RBP3.81□□□□□ -1.8
VPS50-212ENST00000476413 NACAE9PAV3 2078 aa3.81□□□□□ -1.8
VPS50-212ENST00000476413 PIKFYVEQ9Y2I7 2098 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 MAPK8IP3Q9UPT6 1336 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 HOXA9P31269 272 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 ZNF138P52744 262 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 IRF8Q02556 426 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 POU2AF1Q16633 256 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 PGGHGQ32M88 737 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 SSX9Q7RTT3 188 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 KATNAL2Q8IYT4 538 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 OR2A1Q8NGT9 310 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 NUBPLQ8TB37 319 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 MARCH1Q8TCQ1 289 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 SLC25A39Q9BZJ4 359 aaPredicted RBP3.8□□□□□ -1.8
VPS50-212ENST00000476413 ELOVL6Q9H5J4 265 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 CCDC59Q9P031 241 aaKnown RBP3.8□□□□□ -1.8
VPS50-212ENST00000476413 PDP1Q9P0J1 537 aaPredicted RBP3.8□□□□□ -1.8
VPS50-212ENST00000476413 CD84Q9UIB8 345 aa3.8□□□□□ -1.8
VPS50-212ENST00000476413 A0A096LNJ9 63 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 KBTBD11-OT1A0A1B0GTJ5 212 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 GOLGA6L7A0A1B0GV03 622 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 NCF1BA6NI72 391 aaPredicted RBP3.79□□□□□ -1.8
VPS50-212ENST00000476413 LRRIQ4A6NIV6 560 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 NCF1CA8MVU1 366 aaPredicted RBP3.79□□□□□ -1.8
VPS50-212ENST00000476413 C11orf94C9JXX5 98 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 K7EMT4 169 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 NUPL2O15504 423 aaKnown RBP3.79□□□□□ -1.8
VPS50-212ENST00000476413 ICOSLGO75144 302 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 CA11O75493 328 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 SLC25A27O95847 323 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 CD160O95971 181 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 CALM1P0DP23 149 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 CALM2P0DP24 149 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 CALM3P0DP25 149 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 ADRB3P13945 408 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 GSTM3P21266 225 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 SP4Q02446 784 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 GGTLC2Q14390 218 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 SF3A2Q15428 464 aaKnown RBP3.79□□□□□ -1.8
VPS50-212ENST00000476413 OR7A5Q15622 319 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 HDDC2Q7Z4H3 204 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 C12orf56Q8IXR9 622 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 Q8N976 141 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 DUSP18Q8NEJ0 188 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 FAM104AQ969W3 186 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 XPO6Q96QU8 1125 aaKnown RBP3.79□□□□□ -1.8
VPS50-212ENST00000476413 CHAC1Q9BUX1 264 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 LINC00597Q9H2U6 94 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 NTN4Q9HB63 628 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms