RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ICOSLGO75144 302 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PAPLNO95428 1278 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 LATS1O95835 1130 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 WDPCPO95876 746 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 C1QBP02746 253 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ATP1B1P05026 303 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 NGFRP08138 427 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 UBL4AP11441 157 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 HOXB6P17509 224 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 C4BPBP20851 252 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 HSD17B2P37059 387 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 FRKP42685 505 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PPT1P50897 306 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 CDK5Q00535 292 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 RPL18Q07020 188 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PDSS1Q5T2R2 415 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 DCAF12L2Q5VW00 463 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF770Q6IQ21 691 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 DCXRQ7Z4W1 244 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 LRP11Q86VZ4 500 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PDZD9Q8IXQ8 264 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ZSCAN1Q8NBB4 408 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 OR4C16Q8NGL9 310 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 OR2L8Q8NGY9 312 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ST8SIA4Q92187 359 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 PLPPR2Q96GM1 343 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 RAB11FIP5Q9BXF6 653 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 EIF5A2Q9GZV4 153 aaKnown RBP4.53□□□□□ -1.68
CCDC39-204ENST00000476379 ERVMER34-1Q9H9K5 563 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 SLC25A19Q9HC21 320 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 EDARQ9UNE0 448 aa4.53□□□□□ -1.68
CCDC39-204ENST00000476379 A0A1W2PP11 408 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM129A0AVI4 362 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SYT7O43581 403 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SNRNP70P08621 437 aaKnown RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 DAOP14920 347 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 NUDT1P36639 197 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CCR9P51686 369 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CLDN20P56880 219 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TAS2R20P59543 309 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ACY1Q03154 408 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 EEF1A2Q05639 463 aaKnown RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 DYRK1AQ13627 763 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TPBGQ13641 420 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZIC1Q15915 447 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 LGALSLQ3ZCW2 172 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ESCO2Q56NI9 601 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TEX261Q6UWH6 196 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 FAM57BQ71RH2 274 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 OR1J2Q8NGS2 313 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF417Q8TAU3 575 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 FBXW5Q969U6 566 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 MOAP1Q96BY2 351 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CYYR1Q96J86 154 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF587Q96SQ5 575 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 GON7Q9BXV9 100 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SIGLEC7Q9Y286 467 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 PCDHGB7Q9Y5F8 929 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 PCDHGA1Q9Y5H4 931 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 NUBP2Q9Y5Y2 271 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 U3KQ87 197 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 DOCK11Q5JSL3 2073 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ANAPC1Q9H1A4 1944 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TRIM64A6NGJ6 449 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TRIM64BA6NI03 449 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SHISA7A6NL88 538 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ADH1BP00325 375 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 RAF1P04049 648 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 HLA-DOBP13765 273 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 FOSL1P15407 271 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 AMY2BP19961 511 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 IL11P20809 199 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 RIDAP52758 137 aaKnown RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF85Q03923 595 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SP6Q3SY56 376 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF585AQ6P3V2 769 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 GSG1LQ6UXU4 331 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 MYPOPQ86VE0 399 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM156Q8N614 296 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 HSD17B11Q8NBQ5 300 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 OR6M1Q8NGM8 313 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 GPR148Q8TDV2 347 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ROBO4Q8WZ75 1007 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 RBPMSQ93062 196 aaKnown RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SORCS2Q96PQ0 1159 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 NRIP3Q9NQ35 241 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 AKAP7Q9P0M2 348 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF281Q9Y2X9 895 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CCDC168Q8NDH2 2452 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 LRRK2Q5S007 2527 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 DLL1O00548 723 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 XRCC2O43543 280 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ANGPTL7O43827 346 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SC5DO75845 299 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 UBL3O95164 117 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CNOT4O95628 575 aaKnown RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ACSM4P0C7M7 580 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM225BP0DP42 221 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 IFNGR1P15260 489 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 DUSP1P28562 367 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms